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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
741.7
nTPM
FANTOM5:
1118.3
Scaled Tags Per Million
Pig:
633.9
nTPM
Allen mouse:
14.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
741.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 557.8
2188
Female, age 91, both hemispheres
673.3
2301
Female, age 85, both hemispheres
598.1
2090
Male, age 80, both hemispheres
503.2
1984
Male, age 76, both hemispheres
456.5
Dorsal cochlear nucleus nTPM: 517.1
2187
Female, age 91, both hemispheres
622.5
2802
Male, age 74, right hemisphere
579.4
2378
Male, age 80, both hemispheres
488.5
2370
Male, age 61, both hemispheres
455.4
2058
Male, age 76, both hemispheres
439.6
Dorsal tegmental nucleus nTPM: 537.3
2083
Male, age 80, both hemispheres
579.8
2326
Male, age 74, both hemispheres
568.8
2358
Male, age 61, both hemispheres
538.7
1936
Male, age 76, left hemisphere
461.9
Dorsolateral tegmental area nTPM: 517.9
2751
Female, age 85, both hemispheres
637.0
2654
Male, age 80, both hemispheres
598.9
2337
Male, age 61, both hemispheres
507.7
2360
Male, age 74, both hemispheres
434.1
2141
Male, age 76, both hemispheres
411.9
Kolliker-Fuse nucleus nTPM: 619.7
2793
Female, age 91, left hemisphere
766.1
2163
Male, age 80, both hemispheres
645.4
2315
Male, age 76, right hemisphere
447.5
Lateral lemniscal nuclei nTPM: 663.3
2169
Male, age 76, both hemispheres
753.1
2036
Male, age 80, both hemispheres
680.0
2320
Female, age 91, left hemisphere
645.7
2746
Female, age 85, left hemisphere
623.8
2453
Male, age 74, right hemisphere
613.8
Lateral parabrachial nucleus nTPM: 567.0
2139
Female, age 85, right hemisphere
605.7
2013
Male, age 80, both hemispheres
598.1
2792
Male, age 76, both hemispheres
538.0
2790
Male, age 61, both hemispheres
526.1
Lateral vestibular nucleus nTPM: 585.8
2184
Male, age 76, both hemispheres
618.0
2311
Male, age 80, both hemispheres
553.6
Locus coeruleus nTPM: 562.5
2014
Male, age 55, unknown
639.0
2720
Male, age 74, both hemispheres
620.6
2123
Female, age 91, both hemispheres
600.1
2317
Female, age 72, unknown
551.9
2788
Male, age 74, unknown
517.6
1980
Male, age 76, both hemispheres
510.2
2162
Male, age 80, both hemispheres
497.8
Medial parabrachial nucleus nTPM: 575.6
2170
Female, age 91, both hemispheres
719.6
2854
Male, age 80, both hemispheres
649.3
2463
Female, age 85, right hemisphere
526.4
2156
Male, age 61, both hemispheres
516.4
2786
Male, age 76, both hemispheres
466.4
Medial periolivary nuclei nTPM: 636.3
2063
Male, age 76, both hemispheres
722.7
2171
Female, age 85, both hemispheres
711.8
2791
Male, age 74, right hemisphere
629.6
2458
Female, age 91, both hemispheres
563.2
2081
Male, age 80, both hemispheres
554.3
Motor facial nucleus nTPM: 627.9
2062
Male, age 76, both hemispheres
760.2
2365
Male, age 74, right hemisphere
672.2
2697
Female, age 85, both hemispheres
669.9
2327
Male, age 80, both hemispheres
571.1
2795
Female, age 91, both hemispheres
566.3
2126
Male, age 61, both hemispheres
527.9
Motor trigeminal nucleus nTPM: 565.0
2560
Male, age 74, both hemispheres
690.5
2079
Male, age 80, both hemispheres
577.3
2321
Female, age 91, both hemispheres
573.7
2335
Male, age 61, both hemispheres
505.8
2309
Male, age 76, both hemispheres
477.5
Nuclei of the trapezoid body nTPM: 649.8
2159
Male, age 61, both hemispheres
772.9
1983
Male, age 76, both hemispheres
690.5
2735
Female, age 85, both hemispheres
651.2
2166
Male, age 80, both hemispheres
579.0
2368
Female, age 91, both hemispheres
555.2
Nucleus raphe magnus nTPM: 674.4
2160
Male, age 61, both hemispheres
847.8
2172
Female, age 85, both hemispheres
678.6
2455
Male, age 74, both hemispheres
652.0
2051
Male, age 76, both hemispheres
645.6
2328
Male, age 80, both hemispheres
628.8
2459
Female, age 91, both hemispheres
593.6
Paramedian reticular nucleus nTPM: 648.9
2050
Female, age 85, both hemispheres
777.4
2057
Male, age 80, both hemispheres
634.1
2052
Male, age 76, both hemispheres
604.0
2313
Male, age 61, both hemispheres
580.3
Pedunculopontine tegmental nucleus nTPM: 513.3
2334
Male, age 80, both hemispheres
546.9
2338
Male, age 61, both hemispheres
507.6
1921
Female, age 85, both hemispheres
485.5
Pontine nuclei nTPM: 741.7
1863
Male, age 55, unknown
909.2
2727
Male, age 61, right hemisphere
838.3
2109
Female, age 72, unknown
820.9
2454
Male, age 74, left hemisphere
754.8
2787
Female, age 85, both hemispheres
729.3
1968
Male, age 76, left hemisphere
704.7
2319
Female, age 91, both hemispheres
656.7
2115
Male, age 80, left hemisphere
519.6
Pontine raphe nucleus nTPM: 577.8
2122
Female, age 85, midline
620.8
2853
Male, age 76, midline
534.8
Posteroventral cochlear nucleus nTPM: 567.7
2135
Female, age 91, both hemispheres
652.0
2341
Male, age 80, both hemispheres
583.9
2752
Female, age 85, both hemispheres
556.0
2070
Male, age 76, both hemispheres
528.0
2371
Male, age 61, both hemispheres
518.5
Principal sensory trigeminal nucleus nTPM: 643.3
2158
Male, age 61, both hemispheres
730.2
2367
Female, age 91, left hemisphere
657.5
2008
Male, age 80, left hemisphere
631.8
2324
Male, age 76, both hemispheres
553.7
Reticular pontine nucleus, caudal nTPM: 629.9
2559
Male, age 74, both hemispheres
665.0
2092
Male, age 76, both hemispheres
629.3
2457
Female, age 91, both hemispheres
620.1
2332
Male, age 80, right hemisphere
605.3
Reticular pontine nucleus, oral nTPM: 611.1
2012
Female, age 85, both hemispheres
671.9
2366
Female, age 91, both hemispheres
651.3
2361
Male, age 74, both hemispheres
628.4
1939
Male, age 80, both hemispheres
611.1
2167
Male, age 76, both hemispheres
492.7
Reticulotegmental nucleus nTPM: 597.0
2452
Male, age 74, both hemispheres
619.7
2322
Female, age 91, both hemispheres
616.6
2325
Male, age 76, both hemispheres
595.7
2333
Male, age 80, both hemispheres
556.0
Spinal trigeminal nucleus, oral nTPM: 526.4
2164
Male, age 80, both hemispheres
620.2
2737
Female, age 85, both hemispheres
514.7
1978
Male, age 76, both hemispheres
444.4
Subcoeruleus area nTPM: 553.8
2369
Female, age 85, left hemisphere
625.9
1958
Male, age 80, both hemispheres
605.9
2089
Male, age 76, left hemisphere
539.9
2323
Female, age 91, left hemisphere
520.3
2451
Male, age 74, both hemispheres
476.8
Superior olive nTPM: 660.6
1875
Female, age 85, both hemispheres
756.4
2020
Male, age 76, both hemispheres
664.7
2364
Male, age 74, right hemisphere
660.2
2561
Female, age 91, both hemispheres
612.5
2329
Male, age 80, right hemisphere
609.2
Ventral periolivary nuclei nTPM: 611.9
2023
Male, age 76, both hemispheres
682.5
2165
Male, age 80, both hemispheres
659.8
2130
Female, age 85, both hemispheres
576.7
2794
Female, age 91, left hemisphere
528.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 611.8
2840
Female, age 85, both hemispheres
668.1
2449
Male, age 74, both hemispheres
644.9
1959
Male, age 76, both hemispheres
619.2
2161
Male, age 80, both hemispheres
591.7
2359
Male, age 61, both hemispheres
577.1
2456
Female, age 91, both hemispheres
569.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
633.9
Pig sample
Sample description
nTPM
Pons nTPM: 633.9
Samples: 4
Max nTPM: 735.3
Min nTPM: 470.4
Sample A
Female
735.3
Sample B
Female
470.4
Sample C
Male
641.7
Sample D
Male
688.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
