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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
620.7
nTPM
GTEx:
620.7
nTPM
FANTOM5:
279.3
Scaled Tags Per Million
Pig:
318.1
nTPM
Mouse:
834.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
620.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 620.7
Samples: 105
Max nTPM: 1218.0
Min nTPM: 401.0
Std nTPM: 134.9
Median nTPM:
491_1
89 years, female
1218.0
490_1
67 years, female
985.8
501_1
88 years, male
970.5
308_1
70 years, female
932.8
495_1
57 years, female
892.6
413_1
59 years, female
824.5
414_1
84 years, female
824.3
137_1
83 years, male
823.6
315_1
62 years, female
805.2
43_1
64 years, female
790.5
139_1
64 years, female
786.8
518_1
75 years, female
765.0
307_1
66 years, female
757.2
17_1
71 years, male
746.0
173_1
67 years, male
745.0
89_1
63 years, male
744.1
415_1
77 years, female
741.4
145_1
84 years, male
734.5
4_1
88 years, female
732.4
142_1
61 years, female
731.3
120_1
70 years, female
726.3
149_1
88 years, male
720.2
35_1
74 years, female
718.1
375_1
74 years, female
715.4
162_1
79 years, female
714.3
322_1
76 years, male
705.6
119_1
70 years, female
702.7
295_1
61 years, female
701.6
466_1
57 years, female
693.3
126_1
63 years, male
666.9
347_1
72 years, male
665.3
288_1
66 years, female
662.6
324_1
76 years, male
661.5
109_1
81 years, female
660.9
396_1
62 years, male
656.6
313_1
79 years, female
655.1
2_1
77 years, female
653.3
384_1
83 years, male
653.0
314_1
67 years, male
649.7
316_1
62 years, male
647.8
6_1
73 years, female
642.3
42_1
85 years, male
636.5
379_1
60 years, male
635.9
117_1
61 years, male
626.3
348_1
84 years, male
622.9
41_1
94 years, female
616.1
447_1
81 years, male
612.5
266_1
85 years, male
611.3
389_1
86 years, female
607.6
499_1
55 years, female
606.7
317_1
60 years, male
606.1
311_1
78 years, male
603.3
32_1
67 years, male
602.4
506_1
65 years, male
601.5
526_1
61 years, male
600.4
99_1
64 years, male
597.8
18_1
88 years, male
597.3
503_1
68 years, male
594.4
81_1
67 years, male
593.0
468_1
89 years, male
586.5
351_1
91 years, male
578.4
377_1
82 years, female
577.2
406_1
79 years, male
573.4
405_1
91 years, male
569.8
480_1
63 years, male
564.5
386_1
76 years, male
558.0
265_1
87 years, male
552.8
217_1
76 years, male
548.3
452_1
88 years, female
542.4
376_1
75 years, female
540.8
218_1
71 years, female
537.7
404_1
82 years, female
536.6
319_1
81 years, male
533.7
153_1
70 years, female
532.1
115_1
83 years, male
529.6
254_1
77 years, female
528.7
237_1
82 years, male
527.3
246_1
77 years, male
527.0
243_1
75 years, male
525.2
318_1
68 years, male
520.5
264_1
73 years, female
519.9
335_1
73 years, female
519.4
354_1
81 years, female
517.4
189_1
76 years, male
515.7
394_1
75 years, female
506.0
251_1
78 years, male
505.0
286_1
68 years, female
501.4
9_1
66 years, female
496.1
349_1
83 years, male
495.7
321_1
62 years, female
494.1
291_1
76 years, male
491.9
517_1
88 years, male
485.3
353_1
82 years, female
480.7
229_1
69 years, female
478.4
292_1
71 years, male
469.5
320_1
89 years, female
468.6
355_1
70 years, female
464.6
350_1
84 years, female
461.1
172_1
72 years, female
456.0
356_1
87 years, female
447.0
177_1
74 years, male
444.7
425_1
59 years, female
436.0
352_1
62 years, male
425.2
163_1
78 years, male
401.3
293_1
68 years, female
401.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.