HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:14.8 nTPM
HPA Brain:25.1 nTPM
GTEx:14.8 nTPM
FANTOM5:67.3 Scaled Tags Per Million
Pig:1.5 nTPM
Mouse:54.7 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044125Antibody CAB034082
Glial cells MediumNot detected
Neuronal cells LowMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
1898 Male, age 80, left hemisphere 28.5
2529 Female, age 94, left hemisphere 24.7
1911 Female, age 85, right hemisphere 21.6
1855 Male, age 76, left hemisphere 20.8
2148 Female, age 91, left hemisphere 18.5
2621 Female, age 67, right hemisphere 16.2
Dentate gyrus
nTPM: 22.4
1927 Female, age 91, both hemispheres 27.1
2530 Female, age 94, left hemisphere 25.8
2010 Male, age 76, both hemispheres 22.5
2246 Female, age 85, both hemispheres 21.2
2528 Male, age 74, both hemispheres 20.3
2531 Female, age 67, both hemispheres 17.5
Entorhinal gyrus
nTPM: 19.9
1938 Female, age 85, left hemisphere 27.9
1787 Male, age 76, left hemisphere 21.1
2117 Female, age 91, right hemisphere 19.9
2764 Male, age 80, right hemisphere 19.6
2686 Male, age 75, right hemisphere 17.1
2613 Female, age 94, left hemisphere 13.9
Hippocampus, CA1
nTPM: 23.6
2749 Male, age 80, left hemisphere 33.7
1873 Female, age 85, both hemispheres 25.3
2527 Male, age 74, both hemispheres 21.1
2045 Male, age 76, both hemispheres 19.3
2082 Female, age 91, right hemisphere 18.4
Hippocampus, CA2
nTPM: 22.3
1892 Male, age 76, both hemispheres 29.0
1963 Male, age 80, left hemisphere 25.4
2249 Male, age 74, both hemispheres 21.0
2437 Female, age 94, left hemisphere 20.5
1940 Female, age 85, left hemisphere 19.6
2113 Female, age 91, right hemisphere 18.5
Hippocampus, CA3
nTPM: 22.8
2137 Male, age 80, left hemisphere 28.9
1867 Male, age 76, both hemispheres 28.0
1891 Female, age 85, both hemispheres 25.9
2620 Female, age 94, left hemisphere 19.6
2436 Male, age 74, both hemispheres 19.3
2861 Female, age 67, both hemispheres 15.2
Parahippocampal cortex
nTPM: 22.0
2250 Female, age 67, right hemisphere 28.3
1850 Male, age 80, both hemispheres 26.9
1990 Female, age 91, right hemisphere 26.0
1933 Female, age 85, both hemispheres 24.4
2245 Female, age 91, both hemispheres 22.2
2018 Male, age 76, both hemispheres 20.2
2692 Male, age 74, both hemispheres 19.5
2693 Female, age 94, both hemispheres 18.4
2532 Female, age 72, left hemisphere 18.0
2622 Female, age 67, right hemisphere 15.7
Perirhinal gyrus
nTPM: 25.1
1847 Female, age 91, left hemisphere 31.7
1841 Female, age 85, right hemisphere 28.8
1794 Male, age 80, right hemisphere 26.2
2848 Male, age 76, right hemisphere 21.2
2521 Female, age 94, right hemisphere 17.8
Subiculum
nTPM: 20.2
1901 Male, age 80, both hemispheres 24.0
1977 Female, age 85, both hemispheres 22.6
2042 Male, age 76, both hemispheres 19.6
2438 Female, age 94, left hemisphere 19.3
2729 Female, age 91, right hemisphere 19.1
2619 Male, age 74, both hemispheres 16.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 197

Max nTPM: 37.5
Min nTPM: 7.8
Std nTPM: 3.9
Median nTPM: 14.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 26.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 24.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 23.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 22.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 22.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.3
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 47.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.5
Pig sample Sample description nTPM
Subiculum
nTPM: 1.4
Samples: 4

Max nTPM: 2.1
Min nTPM: 0.8
Sample A Female 0.8
Sample B Female 1.6
Sample C Male 0.9
Sample D Male 2.1
Dorsal hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 2.8
Min nTPM: 0.5
Sample A Female 0.5
Sample B Female 1.2
Sample C Male 1.4
Sample D Male 2.8
Entorhinal cortex
nTPM: 1.4
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.3
Sample A Female 1.8
Sample B Female 1.3
Sample C Male 1.3
Sample D Male 1.3
Ventral hippocampus
nTPM: 1.1
Samples: 4

Max nTPM: 2.0
Min nTPM: 0.3
Sample A Female 0.3
Sample B Female 1.2
Sample C Male 0.9
Sample D Male 2.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.0
Samples: 4

Max nTPM: 56.8
Min nTPM: 44.0
Sample A Male 44.0
Sample B Male 52.3
Sample C Female 50.9
Sample D Female 56.8
Hippocampal formation
nTPM: 54.7
Samples: 4

Max nTPM: 63.8
Min nTPM: 49.5
Sample A Male 63.8
Sample B Male 53.0
Sample C Female 52.5
Sample D Female 49.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70565123 Antisense, RP_050623_04_C04, Mouse strain C57BL/6J (56 days, male) 2.1

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