HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:180.4 nTPM
HPA Brain:89.6 nTPM
GTEx:180.4 nTPM
FANTOM5:330.7 Scaled Tags Per Million
Mouse:167.8 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038755Antibody HPA048272Antibody CAB017366
Glial cells HighNot detectedMedium
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.6
Sample id Sample description nTPM
Hippocampus
nTPM: 87.9
1898 Male, age 80, left hemisphere 109.0
2529 Female, age 94, left hemisphere 99.1
1855 Male, age 76, left hemisphere 83.6
2621 Female, age 67, right hemisphere 83.5
1911 Female, age 85, right hemisphere 82.9
2148 Female, age 91, left hemisphere 69.4
Dentate gyrus
nTPM: 76.6
2010 Male, age 76, both hemispheres 91.9
2246 Female, age 85, both hemispheres 82.2
2528 Male, age 74, both hemispheres 80.2
1927 Female, age 91, both hemispheres 78.2
2530 Female, age 94, left hemisphere 76.0
2531 Female, age 67, both hemispheres 51.0
Entorhinal gyrus
nTPM: 67.1
1938 Female, age 85, left hemisphere 83.1
2117 Female, age 91, right hemisphere 81.4
1787 Male, age 76, left hemisphere 79.3
2764 Male, age 80, right hemisphere 61.7
2686 Male, age 75, right hemisphere 58.9
2613 Female, age 94, left hemisphere 37.9
Hippocampus, CA1
nTPM: 87.5
2045 Male, age 76, both hemispheres 97.8
2749 Male, age 80, left hemisphere 95.9
2527 Male, age 74, both hemispheres 93.6
1873 Female, age 85, both hemispheres 86.6
2082 Female, age 91, right hemisphere 63.7
Hippocampus, CA2
nTPM: 89.6
2249 Male, age 74, both hemispheres 116.1
1892 Male, age 76, both hemispheres 115.1
1963 Male, age 80, left hemisphere 81.6
1940 Female, age 85, left hemisphere 79.5
2437 Female, age 94, left hemisphere 73.2
2113 Female, age 91, right hemisphere 72.0
Hippocampus, CA3
nTPM: 87.4
2436 Male, age 74, both hemispheres 124.5
1867 Male, age 76, both hemispheres 118.2
1891 Female, age 85, both hemispheres 93.2
2137 Male, age 80, left hemisphere 82.8
2620 Female, age 94, left hemisphere 61.6
2861 Female, age 67, both hemispheres 44.0
Parahippocampal cortex
nTPM: 76.2
2250 Female, age 67, right hemisphere 93.9
2018 Male, age 76, both hemispheres 86.5
1850 Male, age 80, both hemispheres 84.4
1990 Female, age 91, right hemisphere 79.4
2245 Female, age 91, both hemispheres 79.4
1933 Female, age 85, both hemispheres 78.1
2532 Female, age 72, left hemisphere 74.6
2692 Male, age 74, both hemispheres 64.5
2693 Female, age 94, both hemispheres 64.2
2622 Female, age 67, right hemisphere 56.7
Perirhinal gyrus
nTPM: 75.7
1847 Female, age 91, left hemisphere 83.8
1841 Female, age 85, right hemisphere 82.4
2848 Male, age 76, right hemisphere 77.1
1794 Male, age 80, right hemisphere 70.5
2521 Female, age 94, right hemisphere 64.4
Subiculum
nTPM: 87.2
2042 Male, age 76, both hemispheres 118.2
1901 Male, age 80, both hemispheres 99.7
1977 Female, age 85, both hemispheres 86.5
2619 Male, age 74, both hemispheres 79.9
2438 Female, age 94, left hemisphere 72.2
2729 Female, age 91, right hemisphere 66.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 180.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 180.4
Samples: 197

Max nTPM: 906.9
Min nTPM: 80.0
Std nTPM: 94.0
Median nTPM: 156.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 906.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 642.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 548.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 461.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 457.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 452.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 445.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 398.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 351.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 341.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 337.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 330.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 330.7
FF:10169-103B7 60 years, female 378.0
FF:10153-102I9 76 years, female 283.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 167.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 147.7
Samples: 4

Max nTPM: 158.4
Min nTPM: 129.8
Sample A Male 129.8
Sample B Male 148.9
Sample C Female 158.4
Sample D Female 153.5
Hippocampal formation
nTPM: 167.9
Samples: 4

Max nTPM: 193.8
Min nTPM: 151.1
Sample A Male 193.8
Sample B Male 159.7
Sample C Female 151.1
Sample D Female 166.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
68499485 Antisense, RP_050118_01_F05, Mouse strain C57BL/6J (56 days, male) 11.7

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