HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.9 nTPM
HPA Brain:24.3 nTPM
GTEx:10.9 nTPM
FANTOM5:47.7 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:13.3 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 24.0
2529 Female, age 94, left hemisphere 28.9
1911 Female, age 85, right hemisphere 25.8
1898 Male, age 80, left hemisphere 24.3
2148 Female, age 91, left hemisphere 24.0
1855 Male, age 76, left hemisphere 21.2
2621 Female, age 67, right hemisphere 19.6
Dentate gyrus
nTPM: 21.9
2010 Male, age 76, both hemispheres 30.4
2528 Male, age 74, both hemispheres 23.8
2246 Female, age 85, both hemispheres 22.0
2531 Female, age 67, both hemispheres 20.8
1927 Female, age 91, both hemispheres 19.1
2530 Female, age 94, left hemisphere 15.2
Entorhinal gyrus
nTPM: 20.6
2117 Female, age 91, right hemisphere 26.0
1787 Male, age 76, left hemisphere 24.3
2686 Male, age 75, right hemisphere 21.8
2764 Male, age 80, right hemisphere 18.9
1938 Female, age 85, left hemisphere 16.5
2613 Female, age 94, left hemisphere 16.1
Hippocampus, CA1
nTPM: 24.3
2045 Male, age 76, both hemispheres 27.9
2527 Male, age 74, both hemispheres 26.6
2082 Female, age 91, right hemisphere 26.4
1873 Female, age 85, both hemispheres 22.4
2749 Male, age 80, left hemisphere 18.3
Hippocampus, CA2
nTPM: 23.4
2113 Female, age 91, right hemisphere 28.2
2249 Male, age 74, both hemispheres 25.5
1940 Female, age 85, left hemisphere 24.6
1963 Male, age 80, left hemisphere 23.7
1892 Male, age 76, both hemispheres 20.9
2437 Female, age 94, left hemisphere 17.8
Hippocampus, CA3
nTPM: 21.7
1867 Male, age 76, both hemispheres 24.6
1891 Female, age 85, both hemispheres 23.6
2861 Female, age 67, both hemispheres 22.7
2436 Male, age 74, both hemispheres 21.7
2620 Female, age 94, left hemisphere 19.9
2137 Male, age 80, left hemisphere 17.8
Parahippocampal cortex
nTPM: 22.7
2018 Male, age 76, both hemispheres 33.6
2692 Male, age 74, both hemispheres 23.6
2693 Female, age 94, both hemispheres 23.5
2245 Female, age 91, both hemispheres 23.1
2250 Female, age 67, right hemisphere 22.4
1850 Male, age 80, both hemispheres 21.1
2622 Female, age 67, right hemisphere 20.8
1990 Female, age 91, right hemisphere 19.7
2532 Female, age 72, left hemisphere 19.6
1933 Female, age 85, both hemispheres 19.5
Perirhinal gyrus
nTPM: 21.1
2521 Female, age 94, right hemisphere 24.6
1794 Male, age 80, right hemisphere 22.6
1841 Female, age 85, right hemisphere 20.7
1847 Female, age 91, left hemisphere 20.7
2848 Male, age 76, right hemisphere 17.1
Subiculum
nTPM: 23.5
2619 Male, age 74, both hemispheres 27.4
2042 Male, age 76, both hemispheres 26.8
2729 Female, age 91, right hemisphere 26.2
2438 Female, age 94, left hemisphere 21.1
1977 Female, age 85, both hemispheres 19.8
1901 Male, age 80, both hemispheres 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.9
Samples: 197

Max nTPM: 30.3
Min nTPM: 4.4
Std nTPM: 3.5
Median nTPM: 10.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 30.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 23.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 21.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 21.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 20.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 18.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 17.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 17.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 16.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 16.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 15.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.7
FF:10153-102I9 76 years, female 70.6
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 17.9
Min nTPM: 17.2
Sample A Female 17.9
Sample B Female 17.7
Sample C Male 17.3
Sample D Male 17.2
Dorsal hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 20.1
Min nTPM: 13.5
Sample A Female 19.2
Sample B Female 16.7
Sample C Male 20.1
Sample D Male 13.5
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 18.0
Min nTPM: 15.8
Sample A Female 16.5
Sample B Female 18.0
Sample C Male 16.7
Sample D Male 15.8
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 18.7
Min nTPM: 15.9
Sample A Female 15.9
Sample B Female 16.0
Sample C Male 17.8
Sample D Male 18.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.4
Sample A Male 13.6
Sample B Male 15.2
Sample C Female 13.0
Sample D Female 11.4
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 13.6
Min nTPM: 11.7
Sample A Male 13.6
Sample B Male 12.6
Sample C Female 11.9
Sample D Female 11.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
68844570 Antisense, RP_050222_02_A01, Mouse strain C57BL/6J (56 days, male) 2.1

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