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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
53.0
nTPM
GTEx:
53.0
nTPM
FANTOM5:
42.0
Scaled Tags Per Million
Pig:
34.1
nTPM
Mouse:
21.7
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
53.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 53.0
Samples: 105
Max nTPM: 110.8
Min nTPM: 23.7
Std nTPM: 18.8
Median nTPM:
490_1
67 years, female
110.8
491_1
89 years, female
100.6
308_1
70 years, female
99.2
162_1
79 years, female
93.7
379_1
60 years, male
92.9
347_1
72 years, male
87.0
117_1
61 years, male
85.8
313_1
79 years, female
82.4
386_1
76 years, male
81.8
495_1
57 years, female
79.3
119_1
70 years, female
77.6
396_1
62 years, male
76.8
43_1
64 years, female
76.2
307_1
66 years, female
76.2
142_1
61 years, female
75.7
6_1
73 years, female
75.3
322_1
76 years, male
74.8
375_1
74 years, female
73.6
120_1
70 years, female
72.8
139_1
64 years, female
71.8
447_1
81 years, male
70.0
173_1
67 years, male
69.4
81_1
67 years, male
69.2
348_1
84 years, male
69.2
316_1
62 years, male
67.9
501_1
88 years, male
66.7
145_1
84 years, male
66.6
237_1
82 years, male
64.4
17_1
71 years, male
64.0
518_1
75 years, female
63.8
311_1
78 years, male
63.1
35_1
74 years, female
62.6
89_1
63 years, male
61.3
218_1
71 years, female
60.6
42_1
85 years, male
59.3
41_1
94 years, female
59.0
324_1
76 years, male
58.9
315_1
62 years, female
55.2
466_1
57 years, female
54.1
243_1
75 years, male
53.8
452_1
88 years, female
53.5
354_1
81 years, female
53.1
18_1
88 years, male
52.7
265_1
87 years, male
52.0
415_1
77 years, female
51.5
405_1
91 years, male
51.2
526_1
61 years, male
51.2
109_1
81 years, female
50.9
351_1
91 years, male
50.9
384_1
83 years, male
50.7
149_1
88 years, male
50.2
4_1
88 years, female
49.9
350_1
84 years, female
49.8
414_1
84 years, female
49.8
349_1
83 years, male
49.3
355_1
70 years, female
48.7
32_1
67 years, male
47.5
318_1
68 years, male
45.8
319_1
81 years, male
45.1
288_1
66 years, female
45.0
413_1
59 years, female
44.6
153_1
70 years, female
44.3
99_1
64 years, male
44.0
377_1
82 years, female
43.3
137_1
83 years, male
43.0
468_1
89 years, male
43.0
266_1
85 years, male
42.9
291_1
76 years, male
42.6
314_1
67 years, male
42.4
320_1
89 years, female
42.2
353_1
82 years, female
42.2
2_1
77 years, female
42.1
115_1
83 years, male
42.0
177_1
74 years, male
41.8
189_1
76 years, male
41.8
499_1
55 years, female
40.8
217_1
76 years, male
40.6
389_1
86 years, female
40.6
404_1
82 years, female
40.6
264_1
73 years, female
40.0
376_1
75 years, female
40.0
254_1
77 years, female
39.5
506_1
65 years, male
39.3
295_1
61 years, female
38.1
425_1
59 years, female
38.0
9_1
66 years, female
37.2
335_1
73 years, female
36.0
286_1
68 years, female
35.0
246_1
77 years, male
34.6
292_1
71 years, male
33.0
229_1
69 years, female
32.0
406_1
79 years, male
31.5
317_1
60 years, male
31.3
503_1
68 years, male
31.0
172_1
72 years, female
30.4
126_1
63 years, male
30.3
163_1
78 years, male
30.3
517_1
88 years, male
30.3
251_1
78 years, male
28.2
480_1
63 years, male
26.9
394_1
75 years, female
26.5
356_1
87 years, female
26.1
293_1
68 years, female
26.0
352_1
62 years, male
23.9
321_1
62 years, female
23.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
