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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
173.1
nTPM
FANTOM5:
150.6
Scaled Tags Per Million
Pig:
76.1
nTPM
Allen mouse:
9.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
173.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 152.9
2090
Male, age 80, both hemispheres
168.0
2188
Female, age 91, both hemispheres
158.7
2301
Female, age 85, both hemispheres
145.4
1984
Male, age 76, both hemispheres
139.6
Dorsal cochlear nucleus nTPM: 157.5
2802
Male, age 74, right hemisphere
170.1
2378
Male, age 80, both hemispheres
160.3
2370
Male, age 61, both hemispheres
155.7
2187
Female, age 91, both hemispheres
152.4
2058
Male, age 76, both hemispheres
148.8
Dorsal tegmental nucleus nTPM: 172.0
2358
Male, age 61, both hemispheres
214.2
2326
Male, age 74, both hemispheres
164.0
2083
Male, age 80, both hemispheres
161.8
1936
Male, age 76, left hemisphere
147.9
Dorsolateral tegmental area nTPM: 168.5
2337
Male, age 61, both hemispheres
218.7
2654
Male, age 80, both hemispheres
163.8
2360
Male, age 74, both hemispheres
161.0
2751
Female, age 85, both hemispheres
156.4
2141
Male, age 76, both hemispheres
142.9
Kolliker-Fuse nucleus nTPM: 162.0
2163
Male, age 80, both hemispheres
166.0
2315
Male, age 76, right hemisphere
163.1
2793
Female, age 91, left hemisphere
156.7
Lateral lemniscal nuclei nTPM: 157.7
2169
Male, age 76, both hemispheres
171.3
2036
Male, age 80, both hemispheres
166.3
2746
Female, age 85, left hemisphere
159.8
2453
Male, age 74, right hemisphere
147.1
2320
Female, age 91, left hemisphere
144.1
Lateral parabrachial nucleus nTPM: 169.5
2792
Male, age 76, both hemispheres
179.3
2139
Female, age 85, right hemisphere
168.0
2013
Male, age 80, both hemispheres
167.5
2790
Male, age 61, both hemispheres
163.0
Lateral vestibular nucleus nTPM: 159.9
2184
Male, age 76, both hemispheres
165.5
2311
Male, age 80, both hemispheres
154.3
Locus coeruleus nTPM: 173.1
2014
Male, age 55, unknown
194.2
2123
Female, age 91, both hemispheres
179.8
2317
Female, age 72, unknown
176.0
1980
Male, age 76, both hemispheres
174.6
2162
Male, age 80, both hemispheres
163.8
2720
Male, age 74, both hemispheres
163.8
2788
Male, age 74, unknown
159.2
Medial parabrachial nucleus nTPM: 158.9
2156
Male, age 61, both hemispheres
172.3
2786
Male, age 76, both hemispheres
158.2
2170
Female, age 91, both hemispheres
157.6
2854
Male, age 80, both hemispheres
155.4
2463
Female, age 85, right hemisphere
151.0
Medial periolivary nuclei nTPM: 157.4
2081
Male, age 80, both hemispheres
168.9
2171
Female, age 85, both hemispheres
166.5
2063
Male, age 76, both hemispheres
152.9
2791
Male, age 74, right hemisphere
151.2
2458
Female, age 91, both hemispheres
147.4
Motor facial nucleus nTPM: 151.5
2365
Male, age 74, right hemisphere
159.5
2795
Female, age 91, both hemispheres
156.6
2062
Male, age 76, both hemispheres
155.9
2126
Male, age 61, both hemispheres
153.6
2697
Female, age 85, both hemispheres
148.3
2327
Male, age 80, both hemispheres
135.4
Motor trigeminal nucleus nTPM: 152.4
2079
Male, age 80, both hemispheres
155.9
2309
Male, age 76, both hemispheres
155.4
2335
Male, age 61, both hemispheres
155.0
2560
Male, age 74, both hemispheres
147.9
2321
Female, age 91, both hemispheres
147.7
Nuclei of the trapezoid body nTPM: 155.3
2159
Male, age 61, both hemispheres
165.5
2735
Female, age 85, both hemispheres
158.1
2166
Male, age 80, both hemispheres
156.6
1983
Male, age 76, both hemispheres
151.4
2368
Female, age 91, both hemispheres
145.1
Nucleus raphe magnus nTPM: 153.8
2051
Male, age 76, both hemispheres
161.7
2160
Male, age 61, both hemispheres
161.1
2172
Female, age 85, both hemispheres
158.4
2455
Male, age 74, both hemispheres
155.4
2328
Male, age 80, both hemispheres
146.5
2459
Female, age 91, both hemispheres
139.4
Paramedian reticular nucleus nTPM: 162.2
2052
Male, age 76, both hemispheres
179.3
2057
Male, age 80, both hemispheres
158.7
2050
Female, age 85, both hemispheres
156.0
2313
Male, age 61, both hemispheres
154.8
Pedunculopontine tegmental nucleus nTPM: 164.1
2338
Male, age 61, both hemispheres
191.4
2334
Male, age 80, both hemispheres
158.1
1921
Female, age 85, both hemispheres
142.8
Pontine nuclei nTPM: 160.9
1863
Male, age 55, unknown
180.1
2787
Female, age 85, both hemispheres
176.1
2109
Female, age 72, unknown
165.9
2115
Male, age 80, left hemisphere
164.1
2319
Female, age 91, both hemispheres
157.1
2727
Male, age 61, right hemisphere
148.7
1968
Male, age 76, left hemisphere
148.4
2454
Male, age 74, left hemisphere
146.7
Pontine raphe nucleus nTPM: 147.5
2122
Female, age 85, midline
154.4
2853
Male, age 76, midline
140.6
Posteroventral cochlear nucleus nTPM: 158.1
2341
Male, age 80, both hemispheres
170.1
2135
Female, age 91, both hemispheres
164.2
2070
Male, age 76, both hemispheres
162.8
2752
Female, age 85, both hemispheres
150.3
2371
Male, age 61, both hemispheres
143.1
Principal sensory trigeminal nucleus nTPM: 154.3
2158
Male, age 61, both hemispheres
163.9
2324
Male, age 76, both hemispheres
156.3
2008
Male, age 80, left hemisphere
151.1
2367
Female, age 91, left hemisphere
146.0
Reticular pontine nucleus, caudal nTPM: 149.4
2092
Male, age 76, both hemispheres
154.9
2559
Male, age 74, both hemispheres
152.7
2457
Female, age 91, both hemispheres
148.9
2332
Male, age 80, right hemisphere
141.1
Reticular pontine nucleus, oral nTPM: 154.7
1939
Male, age 80, both hemispheres
165.7
2361
Male, age 74, both hemispheres
161.6
2012
Female, age 85, both hemispheres
158.5
2167
Male, age 76, both hemispheres
148.8
2366
Female, age 91, both hemispheres
138.8
Reticulotegmental nucleus nTPM: 155.5
2333
Male, age 80, both hemispheres
161.9
2452
Male, age 74, both hemispheres
160.3
2325
Male, age 76, both hemispheres
152.8
2322
Female, age 91, both hemispheres
146.9
Spinal trigeminal nucleus, oral nTPM: 146.6
2164
Male, age 80, both hemispheres
158.1
2737
Female, age 85, both hemispheres
148.1
1978
Male, age 76, both hemispheres
133.6
Subcoeruleus area nTPM: 153.5
2451
Male, age 74, both hemispheres
158.3
1958
Male, age 80, both hemispheres
157.0
2369
Female, age 85, left hemisphere
154.3
2089
Male, age 76, left hemisphere
152.0
2323
Female, age 91, left hemisphere
145.7
Superior olive nTPM: 158.7
2020
Male, age 76, both hemispheres
171.8
1875
Female, age 85, both hemispheres
165.7
2364
Male, age 74, right hemisphere
156.2
2561
Female, age 91, both hemispheres
153.6
2329
Male, age 80, right hemisphere
146.0
Ventral periolivary nuclei nTPM: 156.5
2023
Male, age 76, both hemispheres
171.5
2130
Female, age 85, both hemispheres
161.6
2165
Male, age 80, both hemispheres
151.6
2794
Female, age 91, left hemisphere
141.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 155.5
2840
Female, age 85, both hemispheres
166.6
2359
Male, age 61, both hemispheres
164.2
1959
Male, age 76, both hemispheres
156.2
2456
Female, age 91, both hemispheres
152.9
2161
Male, age 80, both hemispheres
150.5
2449
Male, age 74, both hemispheres
142.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
76.1
Pig sample
Sample description
nTPM
Pons nTPM: 76.1
Samples: 4
Max nTPM: 92.5
Min nTPM: 64.1
Sample A
Female
92.5
Sample B
Female
64.1
Sample C
Male
67.3
Sample D
Male
80.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
