We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
157.0
nTPM
FANTOM5:
99.4
Scaled Tags Per Million
Pig:
299.4
nTPM
Allen mouse:
7.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
157.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 127.6
2090
Male, age 80, both hemispheres
130.8
2301
Female, age 85, both hemispheres
130.1
1984
Male, age 76, both hemispheres
126.6
2188
Female, age 91, both hemispheres
122.8
Dorsal cochlear nucleus nTPM: 134.3
2370
Male, age 61, both hemispheres
147.7
2187
Female, age 91, both hemispheres
140.4
2378
Male, age 80, both hemispheres
136.8
2802
Male, age 74, right hemisphere
128.4
2058
Male, age 76, both hemispheres
118.2
Dorsal tegmental nucleus nTPM: 152.7
2358
Male, age 61, both hemispheres
165.7
2083
Male, age 80, both hemispheres
164.8
2326
Male, age 74, both hemispheres
143.6
1936
Male, age 76, left hemisphere
136.9
Dorsolateral tegmental area nTPM: 155.0
2360
Male, age 74, both hemispheres
164.1
2654
Male, age 80, both hemispheres
164.0
2337
Male, age 61, both hemispheres
159.1
2751
Female, age 85, both hemispheres
149.1
2141
Male, age 76, both hemispheres
138.6
Kolliker-Fuse nucleus nTPM: 138.6
2315
Male, age 76, right hemisphere
152.1
2163
Male, age 80, both hemispheres
148.8
2793
Female, age 91, left hemisphere
115.0
Lateral lemniscal nuclei nTPM: 114.3
2169
Male, age 76, both hemispheres
156.6
2746
Female, age 85, left hemisphere
123.4
2036
Male, age 80, both hemispheres
99.3
2320
Female, age 91, left hemisphere
96.9
2453
Male, age 74, right hemisphere
95.4
Lateral parabrachial nucleus nTPM: 135.1
2139
Female, age 85, right hemisphere
155.8
2013
Male, age 80, both hemispheres
138.4
2792
Male, age 76, both hemispheres
130.8
2790
Male, age 61, both hemispheres
115.5
Lateral vestibular nucleus nTPM: 149.7
2184
Male, age 76, both hemispheres
151.3
2311
Male, age 80, both hemispheres
148.1
Locus coeruleus nTPM: 157.0
2123
Female, age 91, both hemispheres
196.6
2014
Male, age 55, unknown
176.4
2788
Male, age 74, unknown
169.6
1980
Male, age 76, both hemispheres
144.0
2162
Male, age 80, both hemispheres
140.5
2720
Male, age 74, both hemispheres
138.6
2317
Female, age 72, unknown
133.0
Medial parabrachial nucleus nTPM: 138.2
2170
Female, age 91, both hemispheres
159.3
2854
Male, age 80, both hemispheres
143.4
2156
Male, age 61, both hemispheres
130.8
2463
Female, age 85, right hemisphere
130.2
2786
Male, age 76, both hemispheres
127.2
Medial periolivary nuclei nTPM: 133.2
2791
Male, age 74, right hemisphere
158.6
2063
Male, age 76, both hemispheres
152.5
2171
Female, age 85, both hemispheres
144.0
2081
Male, age 80, both hemispheres
109.7
2458
Female, age 91, both hemispheres
101.3
Motor facial nucleus nTPM: 131.1
2062
Male, age 76, both hemispheres
157.3
2365
Male, age 74, right hemisphere
154.8
2126
Male, age 61, both hemispheres
139.4
2697
Female, age 85, both hemispheres
125.3
2795
Female, age 91, both hemispheres
109.1
2327
Male, age 80, both hemispheres
100.8
Motor trigeminal nucleus nTPM: 118.9
2335
Male, age 61, both hemispheres
140.4
2309
Male, age 76, both hemispheres
125.3
2560
Male, age 74, both hemispheres
120.1
2079
Male, age 80, both hemispheres
109.3
2321
Female, age 91, both hemispheres
99.5
Nuclei of the trapezoid body nTPM: 137.6
1983
Male, age 76, both hemispheres
162.9
2159
Male, age 61, both hemispheres
154.4
2735
Female, age 85, both hemispheres
140.6
2166
Male, age 80, both hemispheres
118.5
2368
Female, age 91, both hemispheres
111.8
Nucleus raphe magnus nTPM: 131.4
2160
Male, age 61, both hemispheres
168.9
2455
Male, age 74, both hemispheres
141.0
2051
Male, age 76, both hemispheres
131.4
2172
Female, age 85, both hemispheres
130.7
2328
Male, age 80, both hemispheres
113.2
2459
Female, age 91, both hemispheres
103.0
Paramedian reticular nucleus nTPM: 152.0
2052
Male, age 76, both hemispheres
155.6
2057
Male, age 80, both hemispheres
153.4
2050
Female, age 85, both hemispheres
150.8
2313
Male, age 61, both hemispheres
148.4
Pedunculopontine tegmental nucleus nTPM: 154.2
2338
Male, age 61, both hemispheres
162.7
2334
Male, age 80, both hemispheres
152.0
1921
Female, age 85, both hemispheres
147.9
Pontine nuclei nTPM: 141.3
1863
Male, age 55, unknown
174.7
2727
Male, age 61, right hemisphere
161.0
2787
Female, age 85, both hemispheres
148.0
2109
Female, age 72, unknown
144.1
1968
Male, age 76, left hemisphere
142.5
2454
Male, age 74, left hemisphere
133.7
2115
Male, age 80, left hemisphere
116.6
2319
Female, age 91, both hemispheres
109.5
Pontine raphe nucleus nTPM: 153.1
2853
Male, age 76, midline
153.2
2122
Female, age 85, midline
153.0
Posteroventral cochlear nucleus nTPM: 136.1
2752
Female, age 85, both hemispheres
162.8
2070
Male, age 76, both hemispheres
140.8
2341
Male, age 80, both hemispheres
136.2
2371
Male, age 61, both hemispheres
128.7
2135
Female, age 91, both hemispheres
112.1
Principal sensory trigeminal nucleus nTPM: 134.3
2158
Male, age 61, both hemispheres
156.2
2324
Male, age 76, both hemispheres
142.8
2008
Male, age 80, left hemisphere
140.0
2367
Female, age 91, left hemisphere
98.3
Reticular pontine nucleus, caudal nTPM: 127.0
2092
Male, age 76, both hemispheres
147.8
2559
Male, age 74, both hemispheres
131.3
2457
Female, age 91, both hemispheres
115.4
2332
Male, age 80, right hemisphere
113.3
Reticular pontine nucleus, oral nTPM: 149.4
2361
Male, age 74, both hemispheres
176.7
1939
Male, age 80, both hemispheres
165.0
2167
Male, age 76, both hemispheres
148.9
2012
Female, age 85, both hemispheres
141.7
2366
Female, age 91, both hemispheres
114.7
Reticulotegmental nucleus nTPM: 129.6
2325
Male, age 76, both hemispheres
137.1
2322
Female, age 91, both hemispheres
131.6
2333
Male, age 80, both hemispheres
130.5
2452
Male, age 74, both hemispheres
119.1
Spinal trigeminal nucleus, oral nTPM: 133.6
2737
Female, age 85, both hemispheres
143.3
2164
Male, age 80, both hemispheres
133.6
1978
Male, age 76, both hemispheres
124.0
Subcoeruleus area nTPM: 137.0
1958
Male, age 80, both hemispheres
156.8
2323
Female, age 91, left hemisphere
146.0
2369
Female, age 85, left hemisphere
138.0
2451
Male, age 74, both hemispheres
125.2
2089
Male, age 76, left hemisphere
119.1
Superior olive nTPM: 141.0
2364
Male, age 74, right hemisphere
186.0
2020
Male, age 76, both hemispheres
152.7
1875
Female, age 85, both hemispheres
148.3
2329
Male, age 80, right hemisphere
116.2
2561
Female, age 91, both hemispheres
102.0
Ventral periolivary nuclei nTPM: 128.0
2023
Male, age 76, both hemispheres
144.1
2130
Female, age 85, both hemispheres
138.0
2165
Male, age 80, both hemispheres
134.1
2794
Female, age 91, left hemisphere
95.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 130.7
2359
Male, age 61, both hemispheres
150.0
2840
Female, age 85, both hemispheres
147.2
1959
Male, age 76, both hemispheres
136.9
2449
Male, age 74, both hemispheres
123.0
2161
Male, age 80, both hemispheres
121.4
2456
Female, age 91, both hemispheres
105.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
299.4
Pig sample
Sample description
nTPM
Pons nTPM: 299.4
Samples: 4
Max nTPM: 408.7
Min nTPM: 197.2
Sample A
Female
294.1
Sample B
Female
197.2
Sample C
Male
297.7
Sample D
Male
408.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
