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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
115.1
nTPM
GTEx:
115.1
nTPM
FANTOM5:
17.2
Scaled Tags Per Million
Pig:
62.8
nTPM
Mouse:
51.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
115.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 115.1
Samples: 105
Max nTPM: 220.4
Min nTPM: 52.5
Std nTPM: 31.2
Median nTPM:
415_1
77 years, female
220.4
466_1
57 years, female
212.0
149_1
88 years, male
192.7
32_1
67 years, male
185.7
43_1
64 years, female
171.9
81_1
67 years, male
171.6
217_1
76 years, male
167.4
490_1
67 years, female
164.0
162_1
79 years, female
161.9
414_1
84 years, female
157.9
265_1
87 years, male
157.5
405_1
91 years, male
151.4
35_1
74 years, female
150.9
526_1
61 years, male
150.2
468_1
89 years, male
149.5
413_1
59 years, female
148.4
499_1
55 years, female
148.2
229_1
69 years, female
146.2
153_1
70 years, female
142.9
266_1
85 years, male
142.9
335_1
73 years, female
139.6
311_1
78 years, male
138.7
142_1
61 years, female
138.6
237_1
82 years, male
137.1
501_1
88 years, male
133.0
518_1
75 years, female
132.8
324_1
76 years, male
131.9
315_1
62 years, female
130.7
491_1
89 years, female
130.3
9_1
66 years, female
130.1
348_1
84 years, male
128.9
286_1
68 years, female
128.1
495_1
57 years, female
125.7
251_1
78 years, male
124.6
246_1
77 years, male
123.6
318_1
68 years, male
122.7
355_1
70 years, female
122.1
137_1
83 years, male
121.4
117_1
61 years, male
120.4
313_1
79 years, female
118.8
375_1
74 years, female
118.7
425_1
59 years, female
117.5
126_1
63 years, male
117.2
109_1
81 years, female
114.3
115_1
83 years, male
112.9
18_1
88 years, male
112.8
99_1
64 years, male
112.6
145_1
84 years, male
111.5
353_1
82 years, female
110.6
292_1
71 years, male
110.5
503_1
68 years, male
110.1
386_1
76 years, male
110.0
316_1
62 years, male
109.1
264_1
73 years, female
109.0
243_1
75 years, male
108.5
172_1
72 years, female
107.8
288_1
66 years, female
107.0
139_1
64 years, female
106.6
389_1
86 years, female
106.2
396_1
62 years, male
105.5
314_1
67 years, male
105.0
17_1
71 years, male
104.1
480_1
63 years, male
104.0
89_1
63 years, male
103.5
254_1
77 years, female
103.2
406_1
79 years, male
100.5
447_1
81 years, male
100.5
42_1
85 years, male
99.0
347_1
72 years, male
98.7
319_1
81 years, male
98.4
404_1
82 years, female
98.2
308_1
70 years, female
97.3
377_1
82 years, female
97.3
189_1
76 years, male
96.6
6_1
73 years, female
96.5
350_1
84 years, female
95.3
356_1
87 years, female
95.2
352_1
62 years, male
95.1
320_1
89 years, female
94.2
307_1
66 years, female
94.1
351_1
91 years, male
92.3
349_1
83 years, male
92.0
376_1
75 years, female
91.4
517_1
88 years, male
91.1
119_1
70 years, female
90.7
379_1
60 years, male
90.6
177_1
74 years, male
90.5
4_1
88 years, female
88.8
2_1
77 years, female
87.6
173_1
67 years, male
87.2
291_1
76 years, male
86.9
120_1
70 years, female
85.7
321_1
62 years, female
84.3
295_1
61 years, female
84.2
322_1
76 years, male
81.8
354_1
81 years, female
79.6
394_1
75 years, female
78.5
317_1
60 years, male
77.9
163_1
78 years, male
73.5
293_1
68 years, female
69.7
384_1
83 years, male
67.0
452_1
88 years, female
64.2
41_1
94 years, female
63.3
218_1
71 years, female
62.8
506_1
65 years, male
52.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.