HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:171.2 nTPM
HPA Brain:124.3 nTPM
GTEx:171.2 nTPM
FANTOM5:62.3 Scaled Tags Per Million
Pig:92.7 nTPM
Mouse:432.3 nTPM
Allen mouse:23.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.3
Sample id Sample description nTPM
Hippocampus
nTPM: 101.6
1898 Male, age 80, left hemisphere 156.2
1855 Male, age 76, left hemisphere 115.6
2621 Female, age 67, right hemisphere 97.9
2148 Female, age 91, left hemisphere 84.4
1911 Female, age 85, right hemisphere 78.2
2529 Female, age 94, left hemisphere 77.5
Dentate gyrus
nTPM: 114.2
2530 Female, age 94, left hemisphere 151.4
2010 Male, age 76, both hemispheres 139.7
1927 Female, age 91, both hemispheres 131.0
2528 Male, age 74, both hemispheres 100.2
2246 Female, age 85, both hemispheres 91.6
2531 Female, age 67, both hemispheres 71.5
Entorhinal gyrus
nTPM: 95.0
2764 Male, age 80, right hemisphere 123.3
2613 Female, age 94, left hemisphere 104.4
1787 Male, age 76, left hemisphere 99.4
2117 Female, age 91, right hemisphere 96.5
1938 Female, age 85, left hemisphere 95.6
2686 Male, age 75, right hemisphere 50.6
Hippocampus, CA1
nTPM: 124.3
2749 Male, age 80, left hemisphere 213.9
1873 Female, age 85, both hemispheres 114.4
2045 Male, age 76, both hemispheres 114.0
2527 Male, age 74, both hemispheres 89.9
2082 Female, age 91, right hemisphere 89.0
Hippocampus, CA2
nTPM: 119.6
1963 Male, age 80, left hemisphere 177.1
1892 Male, age 76, both hemispheres 155.8
2437 Female, age 94, left hemisphere 106.7
2249 Male, age 74, both hemispheres 105.9
1940 Female, age 85, left hemisphere 92.5
2113 Female, age 91, right hemisphere 79.5
Hippocampus, CA3
nTPM: 106.9
2137 Male, age 80, left hemisphere 135.5
1867 Male, age 76, both hemispheres 126.6
2436 Male, age 74, both hemispheres 120.0
2620 Female, age 94, left hemisphere 105.0
1891 Female, age 85, both hemispheres 85.9
2861 Female, age 67, both hemispheres 68.1
Parahippocampal cortex
nTPM: 87.2
1990 Female, age 91, right hemisphere 108.5
1850 Male, age 80, both hemispheres 105.9
2018 Male, age 76, both hemispheres 102.7
2250 Female, age 67, right hemisphere 100.1
1933 Female, age 85, both hemispheres 97.6
2532 Female, age 72, left hemisphere 86.8
2693 Female, age 94, both hemispheres 80.6
2245 Female, age 91, both hemispheres 80.1
2692 Male, age 74, both hemispheres 57.0
2622 Female, age 67, right hemisphere 52.7
Perirhinal gyrus
nTPM: 114.3
1847 Female, age 91, left hemisphere 136.3
1794 Male, age 80, right hemisphere 126.2
2521 Female, age 94, right hemisphere 115.5
1841 Female, age 85, right hemisphere 109.8
2848 Male, age 76, right hemisphere 83.8
Subiculum
nTPM: 90.9
1901 Male, age 80, both hemispheres 117.8
1977 Female, age 85, both hemispheres 109.2
2042 Male, age 76, both hemispheres 90.4
2619 Male, age 74, both hemispheres 83.3
2729 Female, age 91, right hemisphere 80.4
2438 Female, age 94, left hemisphere 64.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 171.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 171.2
Samples: 197

Max nTPM: 390.4
Min nTPM: 73.2
Std nTPM: 59.5
Median nTPM: 162.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 390.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 384.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 356.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 341.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 326.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 310.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 302.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 284.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 282.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 279.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 276.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.3
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.7
Pig sample Sample description nTPM
Subiculum
nTPM: 71.2
Samples: 4

Max nTPM: 89.5
Min nTPM: 63.9
Sample A Female 89.5
Sample B Female 64.9
Sample C Male 63.9
Sample D Male 66.3
Dorsal hippocampus
nTPM: 92.7
Samples: 4

Max nTPM: 131.7
Min nTPM: 66.1
Sample A Female 131.7
Sample B Female 93.7
Sample C Male 79.2
Sample D Male 66.1
Entorhinal cortex
nTPM: 77.7
Samples: 4

Max nTPM: 86.7
Min nTPM: 64.8
Sample A Female 86.7
Sample B Female 76.9
Sample C Male 82.5
Sample D Male 64.8
Ventral hippocampus
nTPM: 85.6
Samples: 4

Max nTPM: 102.1
Min nTPM: 51.8
Sample A Female 100.2
Sample B Female 51.8
Sample C Male 102.1
Sample D Male 88.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 432.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 432.3
Samples: 4

Max nTPM: 472.2
Min nTPM: 393.4
Sample A Male 393.4
Sample B Male 472.2
Sample C Female 450.2
Sample D Female 413.2
Hippocampal formation
nTPM: 431.5
Samples: 4

Max nTPM: 492.0
Min nTPM: 383.0
Sample A Male 492.0
Sample B Male 383.0
Sample C Female 416.9
Sample D Female 433.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.7
71608227 Antisense, RP_050927_01_C11, Mouse strain C57BL/6J (56 days, male) 26.6
293682 Antisense, RP_040604_02_H09, Mouse strain C57BL/6J (56 days, male) 20.7

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