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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
103.4
nTPM
GTEx:
103.4
nTPM
FANTOM5:
72.5
Scaled Tags Per Million
Pig:
51.4
nTPM
Mouse:
500.8
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
103.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 103.4
Samples: 105
Max nTPM: 172.5
Min nTPM: 42.3
Std nTPM: 28.1
Median nTPM: 0.0
319_1
81 years, male
172.5
321_1
62 years, female
161.9
218_1
71 years, female
151.2
386_1
76 years, male
150.8
354_1
81 years, female
150.4
506_1
65 years, male
146.8
163_1
78 years, male
145.6
377_1
82 years, female
144.4
352_1
62 years, male
144.1
356_1
87 years, female
143.2
350_1
84 years, female
137.6
335_1
73 years, female
135.3
379_1
60 years, male
134.7
243_1
75 years, male
134.6
394_1
75 years, female
134.2
353_1
82 years, female
132.8
6_1
73 years, female
131.3
320_1
89 years, female
130.9
452_1
88 years, female
130.0
376_1
75 years, female
129.0
355_1
70 years, female
127.4
322_1
76 years, male
126.5
4_1
88 years, female
126.3
172_1
72 years, female
124.8
99_1
64 years, male
123.7
349_1
83 years, male
123.4
293_1
68 years, female
122.2
425_1
59 years, female
122.1
2_1
77 years, female
121.4
351_1
91 years, male
120.8
404_1
82 years, female
119.7
447_1
81 years, male
119.6
389_1
86 years, female
119.5
406_1
79 years, male
118.7
384_1
83 years, male
117.4
517_1
88 years, male
117.2
295_1
61 years, female
117.1
177_1
74 years, male
116.7
503_1
68 years, male
115.6
251_1
78 years, male
114.7
145_1
84 years, male
113.9
526_1
61 years, male
112.9
318_1
68 years, male
112.8
17_1
71 years, male
109.7
189_1
76 years, male
109.7
292_1
71 years, male
109.0
153_1
70 years, female
108.4
115_1
83 years, male
107.2
396_1
62 years, male
107.1
286_1
68 years, female
106.8
317_1
60 years, male
106.3
42_1
85 years, male
105.7
237_1
82 years, male
105.2
375_1
74 years, female
104.6
480_1
63 years, male
104.3
316_1
62 years, male
102.5
246_1
77 years, male
101.4
126_1
63 years, male
100.3
173_1
67 years, male
100.3
266_1
85 years, male
100.2
9_1
66 years, female
100.0
137_1
83 years, male
98.9
264_1
73 years, female
98.8
405_1
91 years, male
98.8
347_1
72 years, male
98.2
120_1
70 years, female
98.1
18_1
88 years, male
97.3
35_1
74 years, female
96.2
254_1
77 years, female
95.2
291_1
76 years, male
94.3
229_1
69 years, female
93.9
109_1
81 years, female
92.9
468_1
89 years, male
89.0
117_1
61 years, male
88.7
518_1
75 years, female
86.5
313_1
79 years, female
86.4
324_1
76 years, male
84.4
265_1
87 years, male
84.2
499_1
55 years, female
82.9
288_1
66 years, female
82.8
348_1
84 years, male
82.3
139_1
64 years, female
79.5
315_1
62 years, female
78.3
119_1
70 years, female
77.8
311_1
78 years, male
77.2
308_1
70 years, female
75.1
314_1
67 years, male
74.9
307_1
66 years, female
73.5
217_1
76 years, male
72.7
81_1
67 years, male
69.0
162_1
79 years, female
67.8
142_1
61 years, female
67.5
41_1
94 years, female
66.9
495_1
57 years, female
63.3
32_1
67 years, male
63.2
43_1
64 years, female
63.2
415_1
77 years, female
62.9
466_1
57 years, female
60.3
501_1
88 years, male
59.5
414_1
84 years, female
56.2
89_1
63 years, male
52.3
413_1
59 years, female
46.1
149_1
88 years, male
44.3
490_1
67 years, female
43.0
491_1
89 years, female
42.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
