HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:2.8 nTPM
HPA Brain:42.5 nTPM
GTEx:2.8 nTPM
FANTOM5:45.0 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:7.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025809
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Hippocampus
nTPM: 35.7
1911 Female, age 85, right hemisphere 39.9
2621 Female, age 67, right hemisphere 39.9
2148 Female, age 91, left hemisphere 36.4
2529 Female, age 94, left hemisphere 35.8
1855 Male, age 76, left hemisphere 32.6
1898 Male, age 80, left hemisphere 29.7
Dentate gyrus
nTPM: 36.0
2246 Female, age 85, both hemispheres 43.0
2531 Female, age 67, both hemispheres 40.0
1927 Female, age 91, both hemispheres 37.9
2528 Male, age 74, both hemispheres 35.3
2530 Female, age 94, left hemisphere 31.2
2010 Male, age 76, both hemispheres 28.9
Entorhinal gyrus
nTPM: 37.8
2686 Male, age 75, right hemisphere 45.7
2613 Female, age 94, left hemisphere 43.4
1787 Male, age 76, left hemisphere 38.6
1938 Female, age 85, left hemisphere 38.4
2764 Male, age 80, right hemisphere 31.6
2117 Female, age 91, right hemisphere 29.0
Hippocampus, CA1
nTPM: 39.0
2082 Female, age 91, right hemisphere 47.9
2527 Male, age 74, both hemispheres 42.6
2045 Male, age 76, both hemispheres 37.1
2749 Male, age 80, left hemisphere 35.3
1873 Female, age 85, both hemispheres 32.1
Hippocampus, CA2
nTPM: 37.7
2249 Male, age 74, both hemispheres 46.6
1940 Female, age 85, left hemisphere 45.2
2113 Female, age 91, right hemisphere 43.9
2437 Female, age 94, left hemisphere 34.5
1892 Male, age 76, both hemispheres 28.4
1963 Male, age 80, left hemisphere 27.6
Hippocampus, CA3
nTPM: 42.5
2436 Male, age 74, both hemispheres 62.3
2861 Female, age 67, both hemispheres 43.6
2620 Female, age 94, left hemisphere 42.8
2137 Male, age 80, left hemisphere 42.7
1891 Female, age 85, both hemispheres 32.5
1867 Male, age 76, both hemispheres 31.3
Parahippocampal cortex
nTPM: 41.2
2622 Female, age 67, right hemisphere 57.2
2693 Female, age 94, both hemispheres 44.7
2018 Male, age 76, both hemispheres 43.7
2245 Female, age 91, both hemispheres 43.6
2532 Female, age 72, left hemisphere 42.8
2250 Female, age 67, right hemisphere 41.1
1933 Female, age 85, both hemispheres 39.9
1850 Male, age 80, both hemispheres 35.1
2692 Male, age 74, both hemispheres 32.4
1990 Female, age 91, right hemisphere 31.9
Perirhinal gyrus
nTPM: 41.7
1841 Female, age 85, right hemisphere 48.3
2848 Male, age 76, right hemisphere 43.0
2521 Female, age 94, right hemisphere 41.8
1794 Male, age 80, right hemisphere 39.9
1847 Female, age 91, left hemisphere 35.4
Subiculum
nTPM: 34.8
2619 Male, age 74, both hemispheres 37.8
2438 Female, age 94, left hemisphere 37.6
1977 Female, age 85, both hemispheres 36.2
2729 Female, age 91, right hemisphere 35.5
2042 Male, age 76, both hemispheres 31.3
1901 Male, age 80, both hemispheres 30.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.8
Samples: 197

Max nTPM: 13.4
Min nTPM: 0.5
Std nTPM: 1.7
Median nTPM: 2.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 13.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 10.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 8.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 8.6
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 8.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 8.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 7.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 7.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 6.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 5.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 5.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.0
FF:10169-103B7 60 years, female 56.0
FF:10153-102I9 76 years, female 33.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.9
Sample A Female 7.9
Sample B Female 8.5
Sample C Male 8.3
Sample D Male 9.3
Dorsal hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.0
Sample A Female 7.0
Sample B Female 8.4
Sample C Male 8.4
Sample D Male 9.8
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.2
Sample A Female 9.5
Sample B Female 9.7
Sample C Male 9.2
Sample D Male 11.1
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.3
Sample A Female 8.8
Sample B Female 10.5
Sample C Male 8.3
Sample D Male 9.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 9.8
Min nTPM: 4.7
Sample A Male 4.7
Sample B Male 9.8
Sample C Female 6.2
Sample D Female 8.4
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 7.5
Min nTPM: 4.6
Sample A Male 7.5
Sample B Male 5.0
Sample C Female 4.6
Sample D Female 5.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70565933 Antisense, RP_050628_01_G04, Mouse strain C57BL/6J (56 days, male) 0.1
73716578 Antisense, RP_051206_03_D04, Mouse strain C57BL/6J (56 days, male) 0.1
74988750 Antisense, RP_060315_05_G05, Mouse strain C57BL/6J (56 days, male) 0.1

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