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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
40.8
nTPM
HPA Brain:
50.1
nTPM
GTEx:
40.8
nTPM
FANTOM5:
48.1
Scaled Tags Per Million
Pig:
49.5
nTPM
Mouse:
42.7
nTPM
Allen mouse:
9.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
50.1
Sample id
Sample description
nTPM
Amygdala nTPM: 50.1
1987
Female, age 91, left hemisphere
56.8
2514
Male, age 75, right hemisphere
54.9
2517
Female, age 94, left hemisphere
47.1
2814
Male, age 76, right hemisphere
46.9
2695
Female, age 67, right hemisphere
45.0
Basal amygdala nTPM: 44.6
2110
Male, age 80, left hemisphere
50.4
2243
Female, age 91, right hemisphere
48.8
2685
Female, age 94, left hemisphere
46.4
1955
Male, age 76, both hemispheres
45.1
2609
Male, age 75, right hemisphere
44.2
2827
Female, age 67, right hemisphere
32.7
Central amygdala nTPM: 44.6
2515
Male, age 75, right hemisphere
49.1
1905
Male, age 76, both hemispheres
45.0
2239
Male, age 80, left hemisphere
44.3
2826
Female, age 94, left hemisphere
43.1
2701
Female, age 91, right hemisphere
41.5
Corticomedial amygdala nTPM: 48.7
2242
Female, age 91, right hemisphere
58.3
2829
Male, age 80, left hemisphere
54.4
2428
Male, age 75, right hemisphere
49.6
2429
Female, age 94, left hemisphere
49.5
2240
Male, age 76, both hemispheres
44.1
2535
Female, age 67, right hemisphere
36.0
Lateral amygdala nTPM: 42.0
1883
Male, age 76, both hemispheres
48.5
2516
Male, age 75, right hemisphere
45.3
2256
Male, age 80, left hemisphere
42.1
2534
Female, age 94, left hemisphere
42.0
2255
Female, age 91, right hemisphere
40.3
2830
Female, age 67, right hemisphere
34.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
40.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 40.8
Samples: 152
Max nTPM: 113.8
Min nTPM: 22.1
Std nTPM: 10.2
Median nTPM: 40.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
113.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
68.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
59.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
58.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
58.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
58.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
57.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
56.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
53.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
52.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
52.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
52.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
51.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
51.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
51.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
50.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
50.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
49.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
49.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
49.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
49.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
49.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
48.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
48.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
47.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
47.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
46.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
46.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
46.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
46.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
46.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
45.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
45.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
45.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
45.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
45.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
45.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
45.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
44.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
44.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
44.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
44.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
44.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
44.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
44.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
43.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
43.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
43.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
43.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
43.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
43.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
42.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
42.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
42.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
42.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
42.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
42.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
42.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
42.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
42.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
42.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
41.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
41.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
41.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
41.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
40.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
40.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
40.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
40.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
40.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
40.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
40.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
39.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
39.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
39.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
39.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
39.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
39.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
39.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
38.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
38.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
37.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
37.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
37.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
37.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
37.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
37.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
37.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
37.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
37.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
36.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
36.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
36.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
36.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
36.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
36.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
36.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
36.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
35.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
35.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
35.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
35.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
35.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
35.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
34.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
34.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
34.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
34.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
34.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
34.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
34.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
33.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
33.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
33.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
33.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
32.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
32.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
32.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
32.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
32.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
32.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
31.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
30.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
30.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
30.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
30.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
30.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
29.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
29.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
29.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
29.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
29.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
28.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
28.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
28.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
27.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
27.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
27.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
27.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
26.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
24.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
23.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
22.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
42.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 42.8
Samples: 4
Max nTPM: 47.7
Min nTPM: 35.8
Sample A
Male
44.5
Sample B
Male
35.8
Sample C
Female
47.7
Sample D
Female
43.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
