HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:35.3 nTPM
HPA Brain:52.2 nTPM
GTEx:35.3 nTPM
FANTOM5:48.0 Scaled Tags Per Million
Pig:60.7 nTPM
Mouse:41.3 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008297Antibody HPA025922Antibody CAB019277
Glial cells MediumNot detectedMedium
Neuronal cells MediumMediumHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.2
Sample id Sample description nTPM
Hippocampus
nTPM: 50.2
1898 Male, age 80, left hemisphere 54.8
1855 Male, age 76, left hemisphere 50.5
2148 Female, age 91, left hemisphere 50.4
1911 Female, age 85, right hemisphere 49.8
2529 Female, age 94, left hemisphere 47.8
2621 Female, age 67, right hemisphere 47.5
Dentate gyrus
nTPM: 50.2
2528 Male, age 74, both hemispheres 53.2
2246 Female, age 85, both hemispheres 52.9
2531 Female, age 67, both hemispheres 51.8
2010 Male, age 76, both hemispheres 49.9
1927 Female, age 91, both hemispheres 47.3
2530 Female, age 94, left hemisphere 46.0
Entorhinal gyrus
nTPM: 47.4
2117 Female, age 91, right hemisphere 56.7
1938 Female, age 85, left hemisphere 50.2
2764 Male, age 80, right hemisphere 47.2
2613 Female, age 94, left hemisphere 46.2
1787 Male, age 76, left hemisphere 46.1
2686 Male, age 75, right hemisphere 38.0
Hippocampus, CA1
nTPM: 49.0
1873 Female, age 85, both hemispheres 52.9
2045 Male, age 76, both hemispheres 52.6
2082 Female, age 91, right hemisphere 49.0
2527 Male, age 74, both hemispheres 47.9
2749 Male, age 80, left hemisphere 42.4
Hippocampus, CA2
nTPM: 49.2
2249 Male, age 74, both hemispheres 59.6
1940 Female, age 85, left hemisphere 50.2
2113 Female, age 91, right hemisphere 48.8
1963 Male, age 80, left hemisphere 47.9
1892 Male, age 76, both hemispheres 47.8
2437 Female, age 94, left hemisphere 41.0
Hippocampus, CA3
nTPM: 52.2
2436 Male, age 74, both hemispheres 74.5
2620 Female, age 94, left hemisphere 51.9
1891 Female, age 85, both hemispheres 50.8
1867 Male, age 76, both hemispheres 49.9
2861 Female, age 67, both hemispheres 43.7
2137 Male, age 80, left hemisphere 42.2
Parahippocampal cortex
nTPM: 44.0
2250 Female, age 67, right hemisphere 53.0
1933 Female, age 85, both hemispheres 48.6
2018 Male, age 76, both hemispheres 47.4
1990 Female, age 91, right hemisphere 45.1
2532 Female, age 72, left hemisphere 44.5
1850 Male, age 80, both hemispheres 44.3
2245 Female, age 91, both hemispheres 41.4
2693 Female, age 94, both hemispheres 40.6
2692 Male, age 74, both hemispheres 39.8
2622 Female, age 67, right hemisphere 35.6
Perirhinal gyrus
nTPM: 48.0
1847 Female, age 91, left hemisphere 52.1
1841 Female, age 85, right hemisphere 50.1
1794 Male, age 80, right hemisphere 49.6
2521 Female, age 94, right hemisphere 47.2
2848 Male, age 76, right hemisphere 41.1
Subiculum
nTPM: 47.7
2729 Female, age 91, right hemisphere 54.1
1977 Female, age 85, both hemispheres 52.2
2042 Male, age 76, both hemispheres 49.3
1901 Male, age 80, both hemispheres 44.7
2619 Male, age 74, both hemispheres 44.4
2438 Female, age 94, left hemisphere 41.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.3
Samples: 197

Max nTPM: 64.3
Min nTPM: 16.7
Std nTPM: 6.9
Median nTPM: 34.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 64.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 62.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 54.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 54.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 53.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 51.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 51.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 48.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 48.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 47.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 46.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.0
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 44.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.7
Pig sample Sample description nTPM
Subiculum
nTPM: 55.7
Samples: 4

Max nTPM: 64.8
Min nTPM: 51.2
Sample A Female 64.8
Sample B Female 53.5
Sample C Male 53.4
Sample D Male 51.2
Dorsal hippocampus
nTPM: 60.7
Samples: 4

Max nTPM: 69.9
Min nTPM: 54.5
Sample A Female 69.9
Sample B Female 59.6
Sample C Male 58.7
Sample D Male 54.5
Entorhinal cortex
nTPM: 50.5
Samples: 4

Max nTPM: 56.7
Min nTPM: 39.2
Sample A Female 56.7
Sample B Female 51.8
Sample C Male 54.1
Sample D Male 39.2
Ventral hippocampus
nTPM: 59.1
Samples: 4

Max nTPM: 73.9
Min nTPM: 45.7
Sample A Female 59.4
Sample B Female 45.7
Sample C Male 73.9
Sample D Male 57.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.8
Samples: 4

Max nTPM: 45.2
Min nTPM: 34.7
Sample A Male 41.0
Sample B Male 34.7
Sample C Female 42.1
Sample D Female 45.2
Hippocampal formation
nTPM: 41.4
Samples: 4

Max nTPM: 42.8
Min nTPM: 39.9
Sample A Male 40.1
Sample B Male 42.6
Sample C Female 42.8
Sample D Female 39.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
100144515 Antisense, RP_110421_04_B04, Mouse strain C57BL/6J (56 days, male) 10.0
906 Antisense, RP_Baylor_103008, Mouse strain C57BL/6J (56 days, male) 6.7

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