HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:134.7 nTPM
HPA Brain:265.5 nTPM
GTEx:134.7 nTPM
FANTOM5:253.8 Scaled Tags Per Million
Pig:286.0 nTPM
Mouse:195.3 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039853Antibody CAB010206
Glial cells Not detectedLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 265.5
Sample id Sample description nTPM
Hippocampus
nTPM: 248.5
2529 Female, age 94, left hemisphere 288.4
1898 Male, age 80, left hemisphere 279.9
2621 Female, age 67, right hemisphere 245.6
1855 Male, age 76, left hemisphere 236.2
2148 Female, age 91, left hemisphere 230.5
1911 Female, age 85, right hemisphere 210.5
Dentate gyrus
nTPM: 265.4
2530 Female, age 94, left hemisphere 439.0
2010 Male, age 76, both hemispheres 269.5
1927 Female, age 91, both hemispheres 239.5
2531 Female, age 67, both hemispheres 229.8
2528 Male, age 74, both hemispheres 214.6
2246 Female, age 85, both hemispheres 200.0
Entorhinal gyrus
nTPM: 265.5
2686 Male, age 75, right hemisphere 283.8
1787 Male, age 76, left hemisphere 269.4
2117 Female, age 91, right hemisphere 265.0
2764 Male, age 80, right hemisphere 260.8
2613 Female, age 94, left hemisphere 257.2
1938 Female, age 85, left hemisphere 256.7
Hippocampus, CA1
nTPM: 224.3
2749 Male, age 80, left hemisphere 284.3
1873 Female, age 85, both hemispheres 242.9
2527 Male, age 74, both hemispheres 227.8
2082 Female, age 91, right hemisphere 192.3
2045 Male, age 76, both hemispheres 174.3
Hippocampus, CA2
nTPM: 262.1
1963 Male, age 80, left hemisphere 351.0
2437 Female, age 94, left hemisphere 277.2
1892 Male, age 76, both hemispheres 274.0
1940 Female, age 85, left hemisphere 247.7
2249 Male, age 74, both hemispheres 217.2
2113 Female, age 91, right hemisphere 205.6
Hippocampus, CA3
nTPM: 217.1
2861 Female, age 67, both hemispheres 251.6
1867 Male, age 76, both hemispheres 246.2
1891 Female, age 85, both hemispheres 220.0
2137 Male, age 80, left hemisphere 216.6
2436 Male, age 74, both hemispheres 197.4
2620 Female, age 94, left hemisphere 170.9
Parahippocampal cortex
nTPM: 259.6
2532 Female, age 72, left hemisphere 317.0
1850 Male, age 80, both hemispheres 292.0
1990 Female, age 91, right hemisphere 272.7
2250 Female, age 67, right hemisphere 262.6
2245 Female, age 91, both hemispheres 257.4
2622 Female, age 67, right hemisphere 253.7
2692 Male, age 74, both hemispheres 245.7
2018 Male, age 76, both hemispheres 240.9
1933 Female, age 85, both hemispheres 228.6
2693 Female, age 94, both hemispheres 225.2
Perirhinal gyrus
nTPM: 261.3
1794 Male, age 80, right hemisphere 284.7
1841 Female, age 85, right hemisphere 283.0
2848 Male, age 76, right hemisphere 251.0
2521 Female, age 94, right hemisphere 247.5
1847 Female, age 91, left hemisphere 240.4
Subiculum
nTPM: 243.0
2438 Female, age 94, left hemisphere 294.1
1901 Male, age 80, both hemispheres 251.1
2619 Male, age 74, both hemispheres 240.3
1977 Female, age 85, both hemispheres 236.9
2042 Male, age 76, both hemispheres 232.9
2729 Female, age 91, right hemisphere 202.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 134.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 134.7
Samples: 197

Max nTPM: 347.6
Min nTPM: 70.0
Std nTPM: 44.7
Median nTPM: 122.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 347.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 301.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 300.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 274.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 265.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 254.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 241.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 230.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 220.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 212.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 210.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 253.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 253.8
FF:10153-102I9 76 years, female 259.4
FF:10169-103B7 60 years, female 248.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 286.0
Pig sample Sample description nTPM
Subiculum
nTPM: 244.5
Samples: 4

Max nTPM: 313.5
Min nTPM: 201.2
Sample A Female 313.5
Sample B Female 245.8
Sample C Male 217.5
Sample D Male 201.2
Dorsal hippocampus
nTPM: 286.0
Samples: 4

Max nTPM: 366.7
Min nTPM: 193.3
Sample A Female 366.7
Sample B Female 257.9
Sample C Male 326.0
Sample D Male 193.3
Entorhinal cortex
nTPM: 270.4
Samples: 4

Max nTPM: 329.7
Min nTPM: 240.8
Sample A Female 240.8
Sample B Female 329.7
Sample C Male 259.1
Sample D Male 251.8
Ventral hippocampus
nTPM: 261.8
Samples: 4

Max nTPM: 300.8
Min nTPM: 216.8
Sample A Female 284.4
Sample B Female 216.8
Sample C Male 300.8
Sample D Male 245.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 195.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 195.3
Samples: 4

Max nTPM: 203.5
Min nTPM: 184.7
Sample A Male 203.5
Sample B Male 200.7
Sample C Female 184.7
Sample D Female 192.2
Hippocampal formation
nTPM: 182.7
Samples: 4

Max nTPM: 194.4
Min nTPM: 170.0
Sample A Male 190.0
Sample B Male 176.5
Sample C Female 194.4
Sample D Female 170.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
70445658 Antisense, RP_050614_04_C09, Mouse strain C57BL/6J (56 days, male) 15.8
74988529 Antisense, RP_060315_05_E08, Mouse strain C57BL/6J (56 days, male) 9.6

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