HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.7 nTPM
HPA Brain:64.3 nTPM
GTEx:35.7 nTPM
FANTOM5:152.1 Scaled Tags Per Million
Pig:109.9 nTPM
Mouse:166.8 nTPM
Allen mouse:23.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026419Antibody CAB037066
Glial cells Not detectedNot detected
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.3
Sample id Sample description nTPM
Hippocampus
nTPM: 55.9
1898 Male, age 80, left hemisphere 71.0
1855 Male, age 76, left hemisphere 58.2
1911 Female, age 85, right hemisphere 56.6
2529 Female, age 94, left hemisphere 52.4
2621 Female, age 67, right hemisphere 51.2
2148 Female, age 91, left hemisphere 46.1
Dentate gyrus
nTPM: 54.6
2010 Male, age 76, both hemispheres 61.9
1927 Female, age 91, both hemispheres 60.9
2530 Female, age 94, left hemisphere 56.4
2528 Male, age 74, both hemispheres 55.3
2246 Female, age 85, both hemispheres 50.2
2531 Female, age 67, both hemispheres 42.6
Entorhinal gyrus
nTPM: 56.4
1938 Female, age 85, left hemisphere 66.8
2117 Female, age 91, right hemisphere 57.6
1787 Male, age 76, left hemisphere 56.7
2613 Female, age 94, left hemisphere 54.3
2764 Male, age 80, right hemisphere 52.9
2686 Male, age 75, right hemisphere 50.0
Hippocampus, CA1
nTPM: 59.3
2749 Male, age 80, left hemisphere 75.3
1873 Female, age 85, both hemispheres 62.5
2527 Male, age 74, both hemispheres 56.7
2045 Male, age 76, both hemispheres 54.0
2082 Female, age 91, right hemisphere 47.8
Hippocampus, CA2
nTPM: 57.9
1892 Male, age 76, both hemispheres 67.1
1963 Male, age 80, left hemisphere 63.0
2249 Male, age 74, both hemispheres 62.9
1940 Female, age 85, left hemisphere 56.1
2113 Female, age 91, right hemisphere 49.0
2437 Female, age 94, left hemisphere 49.0
Hippocampus, CA3
nTPM: 57.1
1867 Male, age 76, both hemispheres 64.4
2137 Male, age 80, left hemisphere 63.6
1891 Female, age 85, both hemispheres 59.3
2436 Male, age 74, both hemispheres 54.4
2620 Female, age 94, left hemisphere 53.4
2861 Female, age 67, both hemispheres 47.5
Parahippocampal cortex
nTPM: 56.8
1850 Male, age 80, both hemispheres 71.7
1933 Female, age 85, both hemispheres 62.1
1990 Female, age 91, right hemisphere 61.8
2693 Female, age 94, both hemispheres 59.3
2018 Male, age 76, both hemispheres 56.6
2250 Female, age 67, right hemisphere 56.2
2532 Female, age 72, left hemisphere 54.8
2245 Female, age 91, both hemispheres 53.1
2692 Male, age 74, both hemispheres 50.5
2622 Female, age 67, right hemisphere 42.0
Perirhinal gyrus
nTPM: 64.3
1847 Female, age 91, left hemisphere 71.3
1841 Female, age 85, right hemisphere 70.4
1794 Male, age 80, right hemisphere 64.0
2848 Male, age 76, right hemisphere 58.1
2521 Female, age 94, right hemisphere 57.5
Subiculum
nTPM: 57.5
1901 Male, age 80, both hemispheres 61.1
1977 Female, age 85, both hemispheres 60.0
2042 Male, age 76, both hemispheres 60.0
2729 Female, age 91, right hemisphere 55.3
2438 Female, age 94, left hemisphere 54.3
2619 Male, age 74, both hemispheres 54.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.7
Samples: 197

Max nTPM: 55.9
Min nTPM: 22.8
Std nTPM: 5.4
Median nTPM: 35.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 55.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 51.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 49.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 49.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 48.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 48.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 47.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 45.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 45.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 45.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 44.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.1
FF:10153-102I9 76 years, female 160.9
FF:10169-103B7 60 years, female 143.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.9
Pig sample Sample description nTPM
Subiculum
nTPM: 96.6
Samples: 4

Max nTPM: 120.5
Min nTPM: 87.6
Sample A Female 120.5
Sample B Female 87.6
Sample C Male 90.2
Sample D Male 88.1
Dorsal hippocampus
nTPM: 109.9
Samples: 4

Max nTPM: 134.7
Min nTPM: 85.3
Sample A Female 134.7
Sample B Female 103.9
Sample C Male 115.6
Sample D Male 85.3
Entorhinal cortex
nTPM: 95.6
Samples: 4

Max nTPM: 100.9
Min nTPM: 82.9
Sample A Female 100.9
Sample B Female 100.0
Sample C Male 98.6
Sample D Male 82.9
Ventral hippocampus
nTPM: 92.5
Samples: 4

Max nTPM: 100.3
Min nTPM: 77.6
Sample A Female 100.3
Sample B Female 77.6
Sample C Male 99.4
Sample D Male 92.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 166.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.2
Samples: 4

Max nTPM: 167.6
Min nTPM: 154.8
Sample A Male 154.8
Sample B Male 160.3
Sample C Female 158.0
Sample D Female 167.6
Hippocampal formation
nTPM: 166.8
Samples: 4

Max nTPM: 172.5
Min nTPM: 155.3
Sample A Male 168.1
Sample B Male 172.5
Sample C Female 171.3
Sample D Female 155.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.6
70539158 Antisense, RP_050324_01_A10, Mouse strain C57BL/6J (56 days, male) 23.6

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