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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
66.8
nTPM
Monaco:
107.7
nTPM
Schmiedel:
83.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.8
HPA sample
nTPM
gdT-cell nTPM: 52.3
Samples: 6
Max nTPM: 66.9
Min nTPM: 31.1
P10809_1007
31.1
P10809_1022
58.5
P10809_1041
60.3
P10809_1060
49.4
P10809_1077
66.9
P10809_1098
47.6
MAIT T-cell nTPM: 49.2
Samples: 6
Max nTPM: 71.4
Min nTPM: 33.1
P10809_1006
33.1
P10809_1024
71.4
P10809_1043
48.5
P10809_1062
56.5
P10809_1083
48.1
P10809_1097
37.3
Memory CD4 T-cell nTPM: 54.5
Samples: 6
Max nTPM: 62.3
Min nTPM: 34.5
P10809_1014
34.5
P10809_1026
60.9
P10809_1045
56.8
P10809_1064
60.1
P10809_1086
62.3
P10809_1113
52.1
Memory CD8 T-cell nTPM: 54.2
Samples: 5
Max nTPM: 63.5
Min nTPM: 38.1
P10809_1012
38.1
P10809_1027
60.8
P10809_1046
46.5
P10809_1065
61.9
P10809_1111
63.5
Naive CD4 T-cell nTPM: 48.3
Samples: 6
Max nTPM: 57.8
Min nTPM: 30.1
P10809_1015
30.1
P10809_1030
46.1
P10809_1049
53.1
P10809_1068
56.0
P10809_1085
57.8
P10809_1112
46.9
Naive CD8 T-cell nTPM: 51.2
Samples: 6
Max nTPM: 67.5
Min nTPM: 29.0
P10809_1016
29.0
P10809_1031
56.6
P10809_1050
48.4
P10809_1069
67.5
P10809_1087
61.1
P10809_1110
44.6
T-reg nTPM: 66.8
Samples: 6
Max nTPM: 88.2
Min nTPM: 36.5
P10809_1018
36.5
P10809_1037
55.1
P10809_1056
88.2
P10809_1075
79.5
P10809_1094
62.1
P10809_1106
79.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 77.2
Samples: 4
Max nTPM: 99.8
Min nTPM: 54.2
RHH5202_R3573
75.1
RHH5230_R3602
54.2
RHH5259_R3631
99.8
RHH5288_R3660
79.5
Effector memory CD8 T-cell nTPM: 96.0
Samples: 4
Max nTPM: 124.5
Min nTPM: 78.0
RHH5203_R3574
78.0
RHH5231_R3603
80.9
RHH5260_R3632
100.6
RHH5289_R3661
124.5
MAIT T-cell nTPM: 87.5
Samples: 4
Max nTPM: 110.4
Min nTPM: 63.3
RHH5233_R3605
81.7
RHH5205_R3576
110.4
RHH5262_R3634
94.4
RHH5297_R3663
63.3
Memory CD4 T-cell TFH nTPM: 79.6
Samples: 4
Max nTPM: 107.5
Min nTPM: 63.4
RHH5300_R3666
65.6
RHH5236_R3608
81.8
RHH5265_R3637
63.4
RHH5208_R3579
107.5
Memory CD4 T-cell Th1 nTPM: 78.6
Samples: 4
Max nTPM: 96.2
Min nTPM: 58.9
RHH5210_R3581
58.9
RHH5302_R3668
78.9
RHH5238_R3610
96.2
RHH5267_R3639
80.4
Memory CD4 T-cell Th1/Th17 nTPM: 88.0
Samples: 4
Max nTPM: 102.6
Min nTPM: 66.5
RHH5303_R3669
87.4
RHH5211_R3582
95.6
RHH5239_R3611
102.6
RHH5268_R3640
66.5
Memory CD4 T-cell Th17 nTPM: 95.3
Samples: 4
Max nTPM: 120.9
Min nTPM: 77.2
RHH5304_R3670
106.0
RHH5212_R3583
77.2
RHH5240_R3612
120.9
RHH5269_R3641
77.2
Memory CD4 T-cell Th2 nTPM: 87.2
Samples: 4
Max nTPM: 94.7
Min nTPM: 81.6
RHH5305_R3671
94.7
RHH5213_R3584
82.4
RHH5241_R3613
81.6
RHH5270_R3642
89.9
Naive CD4 T-cell nTPM: 62.9
Samples: 4
Max nTPM: 74.0
Min nTPM: 56.9
RHH5306_R3672
63.2
RHH5214_R3585
56.9
RHH5242_R3614
57.3
RHH5271_R3643
74.0
Naive CD8 T-cell nTPM: 62.5
Samples: 4
Max nTPM: 73.9
Min nTPM: 46.0
RHH5201_R3572
66.1
RHH5229_R3601
73.9
RHH5258_R3630
46.0
RHH5287_R3659
64.1
Non-Vd2 gdTCR nTPM: 103.5
Samples: 4
Max nTPM: 132.2
Min nTPM: 76.9
RHH5235_R3607
90.7
RHH5264_R3636
132.2
RHH5207_R3578
114.2
RHH5299_R3665
76.9
T-reg nTPM: 77.1
Samples: 4
Max nTPM: 88.1
Min nTPM: 68.7
RHH5301_R3667
68.7
RHH5237_R3609
88.1
RHH5266_R3638
75.0
RHH5209_R3580
76.7
Terminal effector memory CD4 T-cell nTPM: 99.1
Samples: 2
Max nTPM: 100.7
Min nTPM: 97.4
RHH5243_R3615
97.4
RHH5272_R3644
100.7
Terminal effector memory CD8 T-cell nTPM: 107.7
Samples: 4
Max nTPM: 122.1
Min nTPM: 87.1
RHH5232_R3604
112.3
RHH5204_R3575
87.1
RHH5261_R3633
122.1
RHH5296_R3662
109.4
Vd2 gdTCR nTPM: 82.6
Samples: 4
Max nTPM: 102.9
Min nTPM: 62.4
RHH5234_R3606
74.7
RHH5206_R3577
90.3
RHH5263_R3635
102.9
RHH5298_R3664
62.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
