HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:194.1 nTPM
HPA Brain:104.6 nTPM
GTEx:194.1 nTPM
FANTOM5:189.8 Scaled Tags Per Million
Pig:32.9 nTPM
Mouse:41.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020291
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 104.6
Sample id Sample description nTPM
Hippocampus
nTPM: 78.2
1898 Male, age 80, left hemisphere 100.0
2621 Female, age 67, right hemisphere 78.8
1911 Female, age 85, right hemisphere 76.0
2529 Female, age 94, left hemisphere 75.5
1855 Male, age 76, left hemisphere 75.3
2148 Female, age 91, left hemisphere 63.8
Dentate gyrus
nTPM: 78.9
2010 Male, age 76, both hemispheres 99.1
2246 Female, age 85, both hemispheres 84.8
1927 Female, age 91, both hemispheres 79.7
2530 Female, age 94, left hemisphere 73.5
2528 Male, age 74, both hemispheres 68.8
2531 Female, age 67, both hemispheres 67.3
Entorhinal gyrus
nTPM: 79.1
1938 Female, age 85, left hemisphere 95.9
2764 Male, age 80, right hemisphere 93.3
1787 Male, age 76, left hemisphere 84.8
2613 Female, age 94, left hemisphere 69.4
2117 Female, age 91, right hemisphere 66.2
2686 Male, age 75, right hemisphere 65.1
Hippocampus, CA1
nTPM: 84.6
2749 Male, age 80, left hemisphere 105.9
2045 Male, age 76, both hemispheres 89.8
1873 Female, age 85, both hemispheres 79.4
2082 Female, age 91, right hemisphere 75.9
2527 Male, age 74, both hemispheres 71.8
Hippocampus, CA2
nTPM: 82.5
1892 Male, age 76, both hemispheres 104.8
1963 Male, age 80, left hemisphere 97.2
2113 Female, age 91, right hemisphere 75.4
1940 Female, age 85, left hemisphere 73.3
2437 Female, age 94, left hemisphere 72.4
2249 Male, age 74, both hemispheres 71.6
Hippocampus, CA3
nTPM: 72.1
1867 Male, age 76, both hemispheres 101.4
2137 Male, age 80, left hemisphere 76.0
1891 Female, age 85, both hemispheres 72.6
2436 Male, age 74, both hemispheres 70.2
2620 Female, age 94, left hemisphere 59.7
2861 Female, age 67, both hemispheres 52.7
Parahippocampal cortex
nTPM: 83.5
1933 Female, age 85, both hemispheres 100.1
1850 Male, age 80, both hemispheres 96.9
2018 Male, age 76, both hemispheres 96.3
2250 Female, age 67, right hemisphere 89.9
1990 Female, age 91, right hemisphere 86.3
2245 Female, age 91, both hemispheres 80.3
2532 Female, age 72, left hemisphere 79.0
2693 Female, age 94, both hemispheres 72.8
2692 Male, age 74, both hemispheres 71.0
2622 Female, age 67, right hemisphere 62.2
Perirhinal gyrus
nTPM: 104.6
1841 Female, age 85, right hemisphere 117.7
1847 Female, age 91, left hemisphere 115.8
1794 Male, age 80, right hemisphere 109.8
2848 Male, age 76, right hemisphere 91.8
2521 Female, age 94, right hemisphere 88.1
Subiculum
nTPM: 82.6
1977 Female, age 85, both hemispheres 106.1
2042 Male, age 76, both hemispheres 86.7
2438 Female, age 94, left hemisphere 80.1
1901 Male, age 80, both hemispheres 77.5
2619 Male, age 74, both hemispheres 77.4
2729 Female, age 91, right hemisphere 67.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 194.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 194.1
Samples: 197

Max nTPM: 672.8
Min nTPM: 96.7
Std nTPM: 64.1
Median nTPM: 189.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 672.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 394.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 388.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 360.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 357.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 336.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 319.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 316.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 307.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 295.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 291.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 189.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 189.8
FF:10169-103B7 60 years, female 229.5
FF:10153-102I9 76 years, female 150.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.9
Pig sample Sample description nTPM
Subiculum
nTPM: 27.2
Samples: 4

Max nTPM: 42.8
Min nTPM: 17.2
Sample A Female 42.8
Sample B Female 25.3
Sample C Male 17.2
Sample D Male 23.3
Dorsal hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 44.6
Min nTPM: 25.3
Sample A Female 44.6
Sample B Female 30.9
Sample C Male 30.6
Sample D Male 25.3
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 43.9
Min nTPM: 19.2
Sample A Female 21.5
Sample B Female 43.9
Sample C Male 29.7
Sample D Male 19.2
Ventral hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 31.4
Min nTPM: 23.7
Sample A Female 31.4
Sample B Female 23.7
Sample C Male 24.1
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 42.5
Min nTPM: 30.5
Sample A Male 30.5
Sample B Male 34.4
Sample C Female 42.5
Sample D Female 31.6
Hippocampal formation
nTPM: 41.9
Samples: 4

Max nTPM: 47.8
Min nTPM: 35.1
Sample A Male 47.8
Sample B Male 35.1
Sample C Female 38.4
Sample D Female 46.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
75198184 Antisense, RP_060502_02_B05, Mouse strain C57BL/6J (56 days, male) 0.3

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