HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:87.6 nTPM
HPA Brain:126.7 nTPM
GTEx:87.6 nTPM
FANTOM5:168.2 Scaled Tags Per Million
Pig:36.6 nTPM
Mouse:150.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003239
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 126.7
Sample id Sample description nTPM
Hippocampus
nTPM: 80.8
1898 Male, age 80, left hemisphere 125.2
2621 Female, age 67, right hemisphere 79.5
1855 Male, age 76, left hemisphere 76.8
2529 Female, age 94, left hemisphere 71.5
1911 Female, age 85, right hemisphere 69.4
2148 Female, age 91, left hemisphere 62.3
Dentate gyrus
nTPM: 85.3
1927 Female, age 91, both hemispheres 102.8
2010 Male, age 76, both hemispheres 90.5
2530 Female, age 94, left hemisphere 86.3
2246 Female, age 85, both hemispheres 85.9
2528 Male, age 74, both hemispheres 77.9
2531 Female, age 67, both hemispheres 68.5
Entorhinal gyrus
nTPM: 83.7
2764 Male, age 80, right hemisphere 110.6
1938 Female, age 85, left hemisphere 99.4
1787 Male, age 76, left hemisphere 91.8
2613 Female, age 94, left hemisphere 81.3
2117 Female, age 91, right hemisphere 63.3
2686 Male, age 75, right hemisphere 55.9
Hippocampus, CA1
nTPM: 98.7
2749 Male, age 80, left hemisphere 155.8
1873 Female, age 85, both hemispheres 100.2
2527 Male, age 74, both hemispheres 82.1
2045 Male, age 76, both hemispheres 79.1
2082 Female, age 91, right hemisphere 76.4
Hippocampus, CA2
nTPM: 92.1
1892 Male, age 76, both hemispheres 125.8
1963 Male, age 80, left hemisphere 104.5
2249 Male, age 74, both hemispheres 92.3
1940 Female, age 85, left hemisphere 88.7
2113 Female, age 91, right hemisphere 70.6
2437 Female, age 94, left hemisphere 70.6
Hippocampus, CA3
nTPM: 85.3
2137 Male, age 80, left hemisphere 119.8
1867 Male, age 76, both hemispheres 101.4
2436 Male, age 74, both hemispheres 86.7
1891 Female, age 85, both hemispheres 81.5
2620 Female, age 94, left hemisphere 69.2
2861 Female, age 67, both hemispheres 53.3
Parahippocampal cortex
nTPM: 90.6
1850 Male, age 80, both hemispheres 140.3
1933 Female, age 85, both hemispheres 102.5
1990 Female, age 91, right hemisphere 99.4
2245 Female, age 91, both hemispheres 94.2
2250 Female, age 67, right hemisphere 94.0
2018 Male, age 76, both hemispheres 85.3
2693 Female, age 94, both hemispheres 83.0
2532 Female, age 72, left hemisphere 81.8
2692 Male, age 74, both hemispheres 67.3
2622 Female, age 67, right hemisphere 58.1
Perirhinal gyrus
nTPM: 126.7
1847 Female, age 91, left hemisphere 145.0
1794 Male, age 80, right hemisphere 141.7
1841 Female, age 85, right hemisphere 129.8
2521 Female, age 94, right hemisphere 120.8
2848 Male, age 76, right hemisphere 96.2
Subiculum
nTPM: 77.8
1977 Female, age 85, both hemispheres 100.2
1901 Male, age 80, both hemispheres 95.8
2438 Female, age 94, left hemisphere 73.7
2042 Male, age 76, both hemispheres 70.8
2619 Male, age 74, both hemispheres 66.8
2729 Female, age 91, right hemisphere 59.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.6
Samples: 197

Max nTPM: 241.3
Min nTPM: 27.3
Std nTPM: 36.3
Median nTPM: 77.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 241.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 202.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 196.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 175.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 168.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 168.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 165.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 162.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 160.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 159.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 159.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 168.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.2
FF:10169-103B7 60 years, female 226.4
FF:10153-102I9 76 years, female 110.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.6
Pig sample Sample description nTPM
Subiculum
nTPM: 28.2
Samples: 4

Max nTPM: 36.7
Min nTPM: 24.8
Sample A Female 36.7
Sample B Female 25.3
Sample C Male 24.8
Sample D Male 26.1
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 48.8
Min nTPM: 26.8
Sample A Female 48.8
Sample B Female 40.3
Sample C Male 30.5
Sample D Male 26.8
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 43.3
Min nTPM: 28.9
Sample A Female 36.3
Sample B Female 43.3
Sample C Male 32.5
Sample D Male 28.9
Ventral hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 37.2
Min nTPM: 22.6
Sample A Female 33.3
Sample B Female 22.6
Sample C Male 26.5
Sample D Male 37.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 150.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 150.0
Samples: 4

Max nTPM: 161.4
Min nTPM: 140.1
Sample A Male 147.9
Sample B Male 161.4
Sample C Female 140.1
Sample D Female 150.7
Hippocampal formation
nTPM: 146.5
Samples: 4

Max nTPM: 163.3
Min nTPM: 139.0
Sample A Male 163.3
Sample B Male 143.7
Sample C Female 139.0
Sample D Female 140.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
73423926 Antisense, RP_051019_03_B08, Mouse strain C57BL/6J (56 days, male) 0.2

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