HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:42.9 nTPM
HPA Brain:58.5 nTPM
GTEx:42.9 nTPM
FANTOM5:165.4 Scaled Tags Per Million
Pig:39.3 nTPM
Mouse:29.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038970
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
2529 Female, age 94, left hemisphere 73.8
2148 Female, age 91, left hemisphere 53.4
1855 Male, age 76, left hemisphere 53.2
1898 Male, age 80, left hemisphere 49.3
1911 Female, age 85, right hemisphere 48.5
2621 Female, age 67, right hemisphere 43.6
Dentate gyrus
nTPM: 49.5
2010 Male, age 76, both hemispheres 65.0
2530 Female, age 94, left hemisphere 57.3
2246 Female, age 85, both hemispheres 45.2
2528 Male, age 74, both hemispheres 43.9
2531 Female, age 67, both hemispheres 43.6
1927 Female, age 91, both hemispheres 42.1
Entorhinal gyrus
nTPM: 51.9
2117 Female, age 91, right hemisphere 67.9
1938 Female, age 85, left hemisphere 55.2
2764 Male, age 80, right hemisphere 51.7
1787 Male, age 76, left hemisphere 50.2
2686 Male, age 75, right hemisphere 47.1
2613 Female, age 94, left hemisphere 39.3
Hippocampus, CA1
nTPM: 58.5
2045 Male, age 76, both hemispheres 85.1
2527 Male, age 74, both hemispheres 59.8
2749 Male, age 80, left hemisphere 56.4
2082 Female, age 91, right hemisphere 45.8
1873 Female, age 85, both hemispheres 45.5
Hippocampus, CA2
nTPM: 52.5
1892 Male, age 76, both hemispheres 63.3
2249 Male, age 74, both hemispheres 55.5
2113 Female, age 91, right hemisphere 53.2
1940 Female, age 85, left hemisphere 52.0
2437 Female, age 94, left hemisphere 51.2
1963 Male, age 80, left hemisphere 39.8
Hippocampus, CA3
nTPM: 52.6
1867 Male, age 76, both hemispheres 72.7
2436 Male, age 74, both hemispheres 56.8
2861 Female, age 67, both hemispheres 48.7
2620 Female, age 94, left hemisphere 48.1
1891 Female, age 85, both hemispheres 47.6
2137 Male, age 80, left hemisphere 41.9
Parahippocampal cortex
nTPM: 52.7
2245 Female, age 91, both hemispheres 67.8
2250 Female, age 67, right hemisphere 61.5
1933 Female, age 85, both hemispheres 56.6
2532 Female, age 72, left hemisphere 55.2
2018 Male, age 76, both hemispheres 52.2
1990 Female, age 91, right hemisphere 52.0
2622 Female, age 67, right hemisphere 51.4
2692 Male, age 74, both hemispheres 48.0
1850 Male, age 80, both hemispheres 43.9
2693 Female, age 94, both hemispheres 38.3
Perirhinal gyrus
nTPM: 52.1
1841 Female, age 85, right hemisphere 56.9
1847 Female, age 91, left hemisphere 56.4
2848 Male, age 76, right hemisphere 54.4
1794 Male, age 80, right hemisphere 47.1
2521 Female, age 94, right hemisphere 45.9
Subiculum
nTPM: 49.9
2042 Male, age 76, both hemispheres 62.5
2619 Male, age 74, both hemispheres 50.5
1977 Female, age 85, both hemispheres 49.2
2729 Female, age 91, right hemisphere 47.8
2438 Female, age 94, left hemisphere 44.9
1901 Male, age 80, both hemispheres 44.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.9
Samples: 197

Max nTPM: 93.2
Min nTPM: 24.5
Std nTPM: 12.0
Median nTPM: 40.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 93.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 91.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 84.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 75.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 72.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 72.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 64.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 63.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 63.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 165.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 165.4
FF:10153-102I9 76 years, female 177.2
FF:10169-103B7 60 years, female 153.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.3
Pig sample Sample description nTPM
Subiculum
nTPM: 39.3
Samples: 4

Max nTPM: 46.7
Min nTPM: 33.1
Sample A Female 46.7
Sample B Female 37.4
Sample C Male 33.1
Sample D Male 40.0
Dorsal hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 44.4
Min nTPM: 30.1
Sample A Female 44.4
Sample B Female 38.9
Sample C Male 40.3
Sample D Male 30.1
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 42.0
Min nTPM: 29.7
Sample A Female 30.3
Sample B Female 42.0
Sample C Male 39.2
Sample D Male 29.7
Ventral hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 36.5
Min nTPM: 34.1
Sample A Female 34.1
Sample B Female 35.6
Sample C Male 35.0
Sample D Male 36.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 26.8
Min nTPM: 24.8
Sample A Male 24.8
Sample B Male 24.8
Sample C Female 26.8
Sample D Female 25.0
Hippocampal formation
nTPM: 29.4
Samples: 4

Max nTPM: 31.1
Min nTPM: 26.7
Sample A Male 30.3
Sample B Male 26.7
Sample C Female 31.1
Sample D Female 29.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
631720 Antisense, RP_040907_01_B11, Mouse strain C57BL/6J (56 days, male) 0.1

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