We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
4399.8
nTPM
HPA Brain:
4776.4
nTPM
GTEx:
4399.8
nTPM
FANTOM5:
5918.9
Scaled Tags Per Million
Pig:
4172.3
nTPM
Mouse:
1082.3
nTPM
Allen mouse:
16.5
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA000572
Antibody CAB016253
Antibody CAB080180
Glial cells
Not detected
Low
High
Neuronal cells
Medium
Medium
High
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
4776.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 4776.4
2529
Female, age 94, left hemisphere
5925.8
1898
Male, age 80, left hemisphere
5098.0
2148
Female, age 91, left hemisphere
4942.6
2621
Female, age 67, right hemisphere
4462.9
1911
Female, age 85, right hemisphere
4260.6
1855
Male, age 76, left hemisphere
3968.9
Dentate gyrus nTPM: 3929.8
2528
Male, age 74, both hemispheres
5619.2
2530
Female, age 94, left hemisphere
4269.4
2246
Female, age 85, both hemispheres
4189.0
2010
Male, age 76, both hemispheres
3456.7
1927
Female, age 91, both hemispheres
3241.4
2531
Female, age 67, both hemispheres
2803.4
Entorhinal gyrus nTPM: 3780.2
2117
Female, age 91, right hemisphere
5940.6
1938
Female, age 85, left hemisphere
4545.0
1787
Male, age 76, left hemisphere
3543.2
2764
Male, age 80, right hemisphere
3445.8
2613
Female, age 94, left hemisphere
2773.4
2686
Male, age 75, right hemisphere
2433.1
Hippocampus, CA1 nTPM: 4036.3
2527
Male, age 74, both hemispheres
6188.7
1873
Female, age 85, both hemispheres
4206.3
2082
Female, age 91, right hemisphere
4034.5
2749
Male, age 80, left hemisphere
3481.1
2045
Male, age 76, both hemispheres
2271.1
Hippocampus, CA2 nTPM: 4247.1
2249
Male, age 74, both hemispheres
6544.4
2113
Female, age 91, right hemisphere
4531.0
1940
Female, age 85, left hemisphere
4201.6
2437
Female, age 94, left hemisphere
4057.7
1963
Male, age 80, left hemisphere
3375.8
1892
Male, age 76, both hemispheres
2771.9
Hippocampus, CA3 nTPM: 3832.7
2436
Male, age 74, both hemispheres
6113.7
2620
Female, age 94, left hemisphere
4273.4
1891
Female, age 85, both hemispheres
3759.9
2137
Male, age 80, left hemisphere
3302.2
1867
Male, age 76, both hemispheres
2822.5
2861
Female, age 67, both hemispheres
2724.8
Parahippocampal cortex nTPM: 3821.3
2250
Female, age 67, right hemisphere
5215.5
1933
Female, age 85, both hemispheres
4253.9
2245
Female, age 91, both hemispheres
4251.9
1850
Male, age 80, both hemispheres
4001.7
2622
Female, age 67, right hemisphere
3958.8
1990
Female, age 91, right hemisphere
3858.3
2692
Male, age 74, both hemispheres
3640.5
2532
Female, age 72, left hemisphere
3381.6
2018
Male, age 76, both hemispheres
2891.2
2693
Female, age 94, both hemispheres
2759.9
Perirhinal gyrus nTPM: 3788.1
1794
Male, age 80, right hemisphere
4517.4
1847
Female, age 91, left hemisphere
4366.9
1841
Female, age 85, right hemisphere
4153.7
2521
Female, age 94, right hemisphere
3279.7
2848
Male, age 76, right hemisphere
2622.9
Subiculum nTPM: 4091.7
2729
Female, age 91, right hemisphere
5549.7
2619
Male, age 74, both hemispheres
5112.0
1901
Male, age 80, both hemispheres
3640.8
1977
Female, age 85, both hemispheres
3554.5
2438
Female, age 94, left hemisphere
3546.1
2042
Male, age 76, both hemispheres
3147.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
4399.8
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 4399.8
Samples: 197
Max nTPM: 15848.9
Min nTPM: 919.6
Std nTPM: 2173.9
Median nTPM: 3989.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
15848.9
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
11357.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
11213.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
11077.0
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
10967.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
9559.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
8617.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
8528.1
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
8353.3
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
7738.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
7711.1
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
7702.8
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
7678.9
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
7656.7
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
7641.3
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
7617.1
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
7529.0
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
7488.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
7296.4
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
7046.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
6995.3
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
6946.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
6928.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
6886.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
6796.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
6504.1
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
6443.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
6435.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
6281.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
6201.5
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
6199.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
6187.5
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
6178.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
6132.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
6128.9
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
6069.7
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
6028.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
5997.9
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
5990.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
5978.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
5921.7
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
5826.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
5813.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
5772.8
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
5759.3
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
5750.9
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
5694.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
5674.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
5657.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
5609.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
5417.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
5409.4
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
5373.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
5367.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
5353.8
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
5339.3
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
5312.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
5310.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
5310.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
5306.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
5272.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
5178.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
5146.9
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
5119.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
5039.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
4944.2
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
4844.8
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
4787.9
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
4776.9
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
4769.3
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
4746.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
4743.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
4735.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
4708.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
4699.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
4619.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
4601.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
4596.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
4583.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
4557.9
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
4519.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
4502.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
4494.6
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
4478.9
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
4468.5
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
4428.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
4424.9
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
4416.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
4385.9
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
4283.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
4262.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
4240.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
4198.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
4160.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
4115.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
4086.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
4040.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
4028.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
3989.2
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
3988.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
3964.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
3911.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
3898.1
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
3859.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
3842.5
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
3818.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
3773.2
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
3770.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
3720.9
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
3695.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
3676.7
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
3668.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
3637.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
3630.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
3613.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
3595.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
3571.0
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
3565.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
3545.4
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
3514.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
3507.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
3494.7
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
3463.6
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
3457.7
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
3411.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
3397.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
3385.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
3336.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
3336.5
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
3302.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
3292.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
3216.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
3204.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
3074.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
3070.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
3067.8
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
3054.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
3026.8
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
3023.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
2950.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
2947.6
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
2945.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
2938.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
2926.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
2914.8
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
2876.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
2866.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
2865.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
2860.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
2848.1
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
2758.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
2754.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
2739.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
2713.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
2698.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
2694.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
2662.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
2633.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
2618.7
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
2617.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
2599.3
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
2556.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
2548.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
2532.9
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
2511.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
2496.5
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
2425.7
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
2368.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
2364.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
2362.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
2350.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
2309.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
2270.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
2236.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
2227.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
2211.7
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
2187.3
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
2142.5
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
2124.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
2116.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
2108.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
2051.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
2034.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1972.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
1857.7
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
1809.8
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
1804.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
1594.7
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
1475.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1393.9
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1293.6
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
1282.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
1097.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
1087.1
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
967.1
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
946.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
919.6
Show allShow less
HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1082.3
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 1002.0
Samples: 4
Max nTPM: 1082.0
Min nTPM: 885.6
Sample A
Male
1054.5
Sample B
Male
885.6
Sample C
Female
1082.0
Sample D
Female
985.8
Hippocampal formation nTPM: 1082.3
Samples: 4
Max nTPM: 1276.5
Min nTPM: 952.3
Sample A
Male
1112.8
Sample B
Male
952.3
Sample C
Female
987.6
Sample D
Female
1276.5
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.