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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
3170.7
nTPM
GTEx:
3170.7
nTPM
FANTOM5:
3763.9
Scaled Tags Per Million
Pig:
800.1
nTPM
Mouse:
983.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
3170.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 3170.7
Samples: 105
Max nTPM: 6061.2
Min nTPM: 1646.1
Std nTPM: 797.6
Median nTPM:
452_1
88 years, female
6061.2
264_1
73 years, female
4789.9
384_1
83 years, male
4662.2
351_1
91 years, male
4503.9
375_1
74 years, female
4466.0
189_1
76 years, male
4454.0
237_1
82 years, male
4451.8
506_1
65 years, male
4390.9
42_1
85 years, male
4281.1
99_1
64 years, male
4269.2
349_1
83 years, male
4267.6
295_1
61 years, female
4225.6
4_1
88 years, female
4196.3
354_1
81 years, female
4185.7
406_1
79 years, male
4181.8
480_1
63 years, male
4109.0
394_1
75 years, female
3990.1
308_1
70 years, female
3966.1
173_1
67 years, male
3959.8
319_1
81 years, male
3941.3
376_1
75 years, female
3899.2
501_1
88 years, male
3868.4
17_1
71 years, male
3812.4
254_1
77 years, female
3734.0
377_1
82 years, female
3733.8
389_1
86 years, female
3722.7
177_1
74 years, male
3719.2
526_1
61 years, male
3701.8
137_1
83 years, male
3694.2
353_1
82 years, female
3690.9
396_1
62 years, male
3664.6
379_1
60 years, male
3613.0
347_1
72 years, male
3563.8
322_1
76 years, male
3451.6
356_1
87 years, female
3448.2
288_1
66 years, female
3435.9
117_1
61 years, male
3434.6
348_1
84 years, male
3390.3
414_1
84 years, female
3366.5
229_1
69 years, female
3353.4
313_1
79 years, female
3324.0
447_1
81 years, male
3313.8
320_1
89 years, female
3283.7
145_1
84 years, male
3226.6
405_1
91 years, male
3202.9
142_1
61 years, female
3194.1
243_1
75 years, male
3182.5
109_1
81 years, female
3166.3
265_1
87 years, male
3155.6
35_1
74 years, female
3139.1
386_1
76 years, male
3129.0
9_1
66 years, female
3121.4
115_1
83 years, male
3117.3
41_1
94 years, female
3108.8
163_1
78 years, male
3087.0
120_1
70 years, female
3029.3
350_1
84 years, female
3021.8
316_1
62 years, male
3017.8
352_1
62 years, male
2993.7
425_1
59 years, female
2982.9
251_1
78 years, male
2955.8
355_1
70 years, female
2922.6
404_1
82 years, female
2905.2
286_1
68 years, female
2888.9
119_1
70 years, female
2887.8
291_1
76 years, male
2881.2
518_1
75 years, female
2857.9
126_1
63 years, male
2838.0
162_1
79 years, female
2816.6
321_1
62 years, female
2797.1
217_1
76 years, male
2793.5
315_1
62 years, female
2775.3
172_1
72 years, female
2774.6
314_1
67 years, male
2762.0
6_1
73 years, female
2681.0
335_1
73 years, female
2671.5
317_1
60 years, male
2662.8
81_1
67 years, male
2655.8
266_1
85 years, male
2652.3
18_1
88 years, male
2631.2
292_1
71 years, male
2612.3
324_1
76 years, male
2597.9
153_1
70 years, female
2581.3
503_1
68 years, male
2573.5
499_1
55 years, female
2509.0
517_1
88 years, male
2492.0
307_1
66 years, female
2358.7
318_1
68 years, male
2354.0
218_1
71 years, female
2353.9
413_1
59 years, female
2338.6
415_1
77 years, female
2287.9
293_1
68 years, female
2238.3
468_1
89 years, male
2226.0
2_1
77 years, female
2148.0
246_1
77 years, male
2142.7
139_1
64 years, female
2089.6
311_1
78 years, male
2087.9
491_1
89 years, female
2029.5
43_1
64 years, female
1887.2
495_1
57 years, female
1866.7
149_1
88 years, male
1857.7
89_1
63 years, male
1857.3
32_1
67 years, male
1810.1
490_1
67 years, female
1714.8
466_1
57 years, female
1646.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.