HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:59.0 nTPM
HPA Brain:57.5 nTPM
GTEx:59.0 nTPM
FANTOM5:29.3 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:25.5 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051666
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.5
Sample id Sample description nTPM
Hippocampus
nTPM: 54.6
2621 Female, age 67, right hemisphere 63.0
1898 Male, age 80, left hemisphere 59.8
2148 Female, age 91, left hemisphere 55.5
1911 Female, age 85, right hemisphere 51.8
1855 Male, age 76, left hemisphere 50.2
2529 Female, age 94, left hemisphere 47.6
Dentate gyrus
nTPM: 55.5
2530 Female, age 94, left hemisphere 68.9
1927 Female, age 91, both hemispheres 67.3
2010 Male, age 76, both hemispheres 53.8
2531 Female, age 67, both hemispheres 48.8
2528 Male, age 74, both hemispheres 48.3
2246 Female, age 85, both hemispheres 45.9
Entorhinal gyrus
nTPM: 49.5
2613 Female, age 94, left hemisphere 59.3
2764 Male, age 80, right hemisphere 54.3
1938 Female, age 85, left hemisphere 51.3
2686 Male, age 75, right hemisphere 48.4
1787 Male, age 76, left hemisphere 45.3
2117 Female, age 91, right hemisphere 38.2
Hippocampus, CA1
nTPM: 57.5
2749 Male, age 80, left hemisphere 85.8
1873 Female, age 85, both hemispheres 74.2
2527 Male, age 74, both hemispheres 55.8
2082 Female, age 91, right hemisphere 41.6
2045 Male, age 76, both hemispheres 30.2
Hippocampus, CA2
nTPM: 57.3
1963 Male, age 80, left hemisphere 95.3
1892 Male, age 76, both hemispheres 63.9
2437 Female, age 94, left hemisphere 49.9
2113 Female, age 91, right hemisphere 46.2
2249 Male, age 74, both hemispheres 45.9
1940 Female, age 85, left hemisphere 42.6
Hippocampus, CA3
nTPM: 54.4
2861 Female, age 67, both hemispheres 76.3
2436 Male, age 74, both hemispheres 64.4
2137 Male, age 80, left hemisphere 59.2
2620 Female, age 94, left hemisphere 42.9
1867 Male, age 76, both hemispheres 41.8
1891 Female, age 85, both hemispheres 41.6
Parahippocampal cortex
nTPM: 41.9
2692 Male, age 74, both hemispheres 47.2
2245 Female, age 91, both hemispheres 47.1
1933 Female, age 85, both hemispheres 46.1
1990 Female, age 91, right hemisphere 45.9
2622 Female, age 67, right hemisphere 45.0
2532 Female, age 72, left hemisphere 39.9
2250 Female, age 67, right hemisphere 38.3
1850 Male, age 80, both hemispheres 37.7
2693 Female, age 94, both hemispheres 36.8
2018 Male, age 76, both hemispheres 34.8
Perirhinal gyrus
nTPM: 40.0
1847 Female, age 91, left hemisphere 49.2
2521 Female, age 94, right hemisphere 42.1
1794 Male, age 80, right hemisphere 41.8
1841 Female, age 85, right hemisphere 39.6
2848 Male, age 76, right hemisphere 27.3
Subiculum
nTPM: 39.9
1977 Female, age 85, both hemispheres 46.3
1901 Male, age 80, both hemispheres 45.3
2619 Male, age 74, both hemispheres 42.2
2729 Female, age 91, right hemisphere 39.6
2042 Male, age 76, both hemispheres 37.3
2438 Female, age 94, left hemisphere 29.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.0
Samples: 197

Max nTPM: 155.8
Min nTPM: 17.6
Std nTPM: 25.1
Median nTPM: 55.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 155.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 138.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 134.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 129.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 121.9
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 109.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 107.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 107.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 106.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 105.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 103.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.3
FF:10169-103B7 60 years, female 34.2
FF:10153-102I9 76 years, female 24.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Subiculum
nTPM: 19.5
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.8
Sample A Female 22.0
Sample B Female 18.5
Sample C Male 19.7
Sample D Male 17.8
Dorsal hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 27.5
Min nTPM: 23.5
Sample A Female 27.5
Sample B Female 25.4
Sample C Male 24.0
Sample D Male 23.5
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 26.2
Min nTPM: 19.7
Sample A Female 19.7
Sample B Female 23.7
Sample C Male 26.2
Sample D Male 20.4
Ventral hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 25.8
Min nTPM: 20.2
Sample A Female 22.0
Sample B Female 20.2
Sample C Male 25.8
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.6
Sample A Male 16.3
Sample B Male 17.1
Sample C Female 18.0
Sample D Female 14.6
Hippocampal formation
nTPM: 25.5
Samples: 4

Max nTPM: 27.7
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 25.8
Sample C Female 27.7
Sample D Female 26.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
413790 Antisense, RP_040809_01_D12, Mouse strain C57BL/6J (56 days, male) 0.3
70927829 Antisense, RP_050725_01_B05, Mouse strain C57BL/6J (56 days, male) 0.3

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