HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:6.9 nTPM
HPA Brain:40.3 nTPM
GTEx:6.9 nTPM
FANTOM5:45.4 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:11.6 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038163Antibody HPA038164
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.9
2529 Female, age 94, left hemisphere 46.1
1898 Male, age 80, left hemisphere 40.1
2148 Female, age 91, left hemisphere 39.5
1911 Female, age 85, right hemisphere 38.8
1855 Male, age 76, left hemisphere 38.7
2621 Female, age 67, right hemisphere 36.0
Dentate gyrus
nTPM: 36.0
2528 Male, age 74, both hemispheres 41.0
2010 Male, age 76, both hemispheres 39.2
2530 Female, age 94, left hemisphere 38.1
2246 Female, age 85, both hemispheres 38.0
1927 Female, age 91, both hemispheres 30.8
2531 Female, age 67, both hemispheres 28.6
Entorhinal gyrus
nTPM: 33.9
2117 Female, age 91, right hemisphere 39.8
1787 Male, age 76, left hemisphere 35.3
2686 Male, age 75, right hemisphere 35.1
1938 Female, age 85, left hemisphere 33.1
2764 Male, age 80, right hemisphere 31.6
2613 Female, age 94, left hemisphere 28.1
Hippocampus, CA1
nTPM: 37.1
2082 Female, age 91, right hemisphere 42.9
2527 Male, age 74, both hemispheres 40.9
1873 Female, age 85, both hemispheres 37.5
2045 Male, age 76, both hemispheres 35.4
2749 Male, age 80, left hemisphere 28.6
Hippocampus, CA2
nTPM: 37.5
2249 Male, age 74, both hemispheres 42.7
1940 Female, age 85, left hemisphere 41.0
2113 Female, age 91, right hemisphere 39.0
2437 Female, age 94, left hemisphere 36.3
1963 Male, age 80, left hemisphere 35.3
1892 Male, age 76, both hemispheres 30.6
Hippocampus, CA3
nTPM: 35.9
2436 Male, age 74, both hemispheres 41.7
1891 Female, age 85, both hemispheres 37.8
2861 Female, age 67, both hemispheres 36.1
1867 Male, age 76, both hemispheres 34.7
2137 Male, age 80, left hemisphere 33.7
2620 Female, age 94, left hemisphere 31.7
Parahippocampal cortex
nTPM: 37.9
2692 Male, age 74, both hemispheres 45.5
2250 Female, age 67, right hemisphere 44.7
2018 Male, age 76, both hemispheres 43.0
1933 Female, age 85, both hemispheres 40.0
2622 Female, age 67, right hemisphere 37.5
1990 Female, age 91, right hemisphere 34.8
1850 Male, age 80, both hemispheres 34.7
2245 Female, age 91, both hemispheres 34.1
2532 Female, age 72, left hemisphere 33.3
2693 Female, age 94, both hemispheres 31.0
Perirhinal gyrus
nTPM: 33.1
1847 Female, age 91, left hemisphere 34.8
1841 Female, age 85, right hemisphere 34.2
2521 Female, age 94, right hemisphere 33.8
2848 Male, age 76, right hemisphere 32.1
1794 Male, age 80, right hemisphere 30.6
Subiculum
nTPM: 40.3
2619 Male, age 74, both hemispheres 46.8
2729 Female, age 91, right hemisphere 41.6
2042 Male, age 76, both hemispheres 40.4
1977 Female, age 85, both hemispheres 38.8
1901 Male, age 80, both hemispheres 38.4
2438 Female, age 94, left hemisphere 36.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.9
Samples: 197

Max nTPM: 14.0
Min nTPM: 2.8
Std nTPM: 1.9
Median nTPM: 6.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 14.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 13.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 12.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 11.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 11.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 11.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 11.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 11.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 10.9
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 10.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 10.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.4
FF:10153-102I9 76 years, female 51.4
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.7
Pig sample Sample description nTPM
Subiculum
nTPM: 9.7
Samples: 4

Max nTPM: 12.3
Min nTPM: 7.4
Sample A Female 10.2
Sample B Female 7.4
Sample C Male 8.9
Sample D Male 12.3
Dorsal hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.1
Sample A Female 7.6
Sample B Female 5.7
Sample C Male 9.6
Sample D Male 5.1
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.7
Sample A Female 10.1
Sample B Female 8.9
Sample C Male 7.9
Sample D Male 7.7
Ventral hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.6
Sample A Female 9.5
Sample B Female 7.0
Sample C Male 9.3
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.3
Sample A Male 11.1
Sample B Male 8.3
Sample C Female 9.3
Sample D Female 7.3
Hippocampal formation
nTPM: 11.6
Samples: 4

Max nTPM: 13.4
Min nTPM: 8.4
Sample A Male 8.4
Sample B Male 12.4
Sample C Female 13.4
Sample D Female 12.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
71249739 Antisense, RP_050414_03_H02, Mouse strain C57BL/6J (56 days, male) 2.9
69443280 Antisense, RP_050414_03_H02, Mouse strain C57BL/6J (56 days, male) 2.3

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