HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:721.6 nTPM
HPA Brain:177.1 nTPM
GTEx:721.6 nTPM
FANTOM5:210.5 Scaled Tags Per Million
Pig:56.3 nTPM
Mouse:295.9 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008587
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 177.1
Sample id Sample description nTPM
Hippocampus
nTPM: 177.1
2529 Female, age 94, left hemisphere 202.2
1898 Male, age 80, left hemisphere 196.5
2621 Female, age 67, right hemisphere 177.5
1855 Male, age 76, left hemisphere 163.6
2148 Female, age 91, left hemisphere 162.7
1911 Female, age 85, right hemisphere 160.2
Dentate gyrus
nTPM: 176.1
2530 Female, age 94, left hemisphere 242.8
2246 Female, age 85, both hemispheres 172.0
2010 Male, age 76, both hemispheres 170.4
2531 Female, age 67, both hemispheres 162.9
1927 Female, age 91, both hemispheres 159.5
2528 Male, age 74, both hemispheres 148.7
Entorhinal gyrus
nTPM: 162.5
2686 Male, age 75, right hemisphere 178.2
1787 Male, age 76, left hemisphere 174.0
2117 Female, age 91, right hemisphere 173.5
1938 Female, age 85, left hemisphere 163.8
2764 Male, age 80, right hemisphere 163.8
2613 Female, age 94, left hemisphere 121.8
Hippocampus, CA1
nTPM: 162.6
2749 Male, age 80, left hemisphere 180.0
2082 Female, age 91, right hemisphere 161.1
2045 Male, age 76, both hemispheres 160.5
2527 Male, age 74, both hemispheres 160.2
1873 Female, age 85, both hemispheres 150.8
Hippocampus, CA2
nTPM: 169.8
1963 Male, age 80, left hemisphere 194.0
1892 Male, age 76, both hemispheres 179.6
2437 Female, age 94, left hemisphere 176.2
2113 Female, age 91, right hemisphere 162.4
2249 Male, age 74, both hemispheres 159.6
1940 Female, age 85, left hemisphere 146.8
Hippocampus, CA3
nTPM: 152.7
1867 Male, age 76, both hemispheres 182.4
2137 Male, age 80, left hemisphere 169.2
1891 Female, age 85, both hemispheres 161.9
2436 Male, age 74, both hemispheres 154.2
2861 Female, age 67, both hemispheres 149.5
2620 Female, age 94, left hemisphere 98.7
Parahippocampal cortex
nTPM: 160.6
2018 Male, age 76, both hemispheres 198.0
2532 Female, age 72, left hemisphere 179.2
2245 Female, age 91, both hemispheres 170.6
1850 Male, age 80, both hemispheres 170.2
1990 Female, age 91, right hemisphere 167.6
1933 Female, age 85, both hemispheres 163.1
2250 Female, age 67, right hemisphere 157.7
2692 Male, age 74, both hemispheres 145.9
2622 Female, age 67, right hemisphere 127.3
2693 Female, age 94, both hemispheres 126.1
Perirhinal gyrus
nTPM: 173.5
1847 Female, age 91, left hemisphere 191.9
1841 Female, age 85, right hemisphere 182.8
1794 Male, age 80, right hemisphere 169.8
2848 Male, age 76, right hemisphere 167.8
2521 Female, age 94, right hemisphere 155.4
Subiculum
nTPM: 167.1
1901 Male, age 80, both hemispheres 186.9
2042 Male, age 76, both hemispheres 181.8
1977 Female, age 85, both hemispheres 176.2
2438 Female, age 94, left hemisphere 168.8
2729 Female, age 91, right hemisphere 149.8
2619 Male, age 74, both hemispheres 139.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 721.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 721.6
Samples: 197

Max nTPM: 1953.7
Min nTPM: 337.9
Std nTPM: 239.2
Median nTPM: 657.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1953.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1565.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1465.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1450.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1412.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1405.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1268.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1263.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1228.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1214.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1212.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 210.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 210.5
FF:10169-103B7 60 years, female 219.1
FF:10153-102I9 76 years, female 202.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.3
Pig sample Sample description nTPM
Subiculum
nTPM: 46.7
Samples: 4

Max nTPM: 64.2
Min nTPM: 37.2
Sample A Female 64.2
Sample B Female 43.8
Sample C Male 37.2
Sample D Male 41.7
Dorsal hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 73.6
Min nTPM: 42.1
Sample A Female 73.6
Sample B Female 55.6
Sample C Male 53.7
Sample D Male 42.1
Entorhinal cortex
nTPM: 53.3
Samples: 4

Max nTPM: 67.8
Min nTPM: 40.6
Sample A Female 52.2
Sample B Female 67.8
Sample C Male 52.7
Sample D Male 40.6
Ventral hippocampus
nTPM: 50.1
Samples: 4

Max nTPM: 54.5
Min nTPM: 41.6
Sample A Female 54.5
Sample B Female 41.6
Sample C Male 51.6
Sample D Male 52.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 295.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 293.5
Samples: 4

Max nTPM: 324.0
Min nTPM: 274.9
Sample A Male 280.0
Sample B Male 295.0
Sample C Female 324.0
Sample D Female 274.9
Hippocampal formation
nTPM: 296.0
Samples: 4

Max nTPM: 356.3
Min nTPM: 258.4
Sample A Male 356.3
Sample B Male 285.6
Sample C Female 283.5
Sample D Female 258.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
68498271 Antisense, RP_050113_01_F04, Mouse strain C57BL/6J (56 days, male) 5.0

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