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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
360.3
nTPM
GTEx:
360.3
nTPM
FANTOM5:
206.8
Scaled Tags Per Million
Pig:
27.4
nTPM
Mouse:
471.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
360.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 360.3
Samples: 105
Max nTPM: 489.4
Min nTPM: 234.6
Std nTPM: 51.1
Median nTPM: 0.0
153_1
70 years, female
489.4
35_1
74 years, female
478.3
246_1
77 years, male
469.1
322_1
76 years, male
455.5
17_1
71 years, male
453.7
379_1
60 years, male
443.0
447_1
81 years, male
442.9
384_1
83 years, male
442.8
377_1
82 years, female
435.7
375_1
74 years, female
433.9
389_1
86 years, female
433.5
2_1
77 years, female
431.9
189_1
76 years, male
430.8
321_1
62 years, female
428.8
319_1
81 years, male
428.6
120_1
70 years, female
424.4
404_1
82 years, female
419.5
126_1
63 years, male
418.2
526_1
61 years, male
412.6
396_1
62 years, male
408.9
4_1
88 years, female
403.2
452_1
88 years, female
402.5
145_1
84 years, male
400.9
237_1
82 years, male
397.2
315_1
62 years, female
395.2
405_1
91 years, male
391.7
139_1
64 years, female
391.4
218_1
71 years, female
390.5
394_1
75 years, female
389.2
173_1
67 years, male
387.7
414_1
84 years, female
387.5
307_1
66 years, female
384.0
109_1
81 years, female
383.7
6_1
73 years, female
382.7
320_1
89 years, female
379.9
137_1
83 years, male
379.5
265_1
87 years, male
377.0
266_1
85 years, male
376.7
386_1
76 years, male
373.5
243_1
75 years, male
371.5
142_1
61 years, female
371.4
162_1
79 years, female
370.4
376_1
75 years, female
370.4
355_1
70 years, female
368.6
254_1
77 years, female
366.0
518_1
75 years, female
364.5
317_1
60 years, male
364.3
229_1
69 years, female
364.1
347_1
72 years, male
363.5
318_1
68 years, male
360.2
18_1
88 years, male
358.2
468_1
89 years, male
358.1
177_1
74 years, male
356.0
308_1
70 years, female
353.2
316_1
62 years, male
353.2
503_1
68 years, male
353.1
311_1
78 years, male
353.0
354_1
81 years, female
349.6
42_1
85 years, male
349.5
495_1
57 years, female
349.3
324_1
76 years, male
347.3
217_1
76 years, male
347.0
335_1
73 years, female
344.6
119_1
70 years, female
341.8
295_1
61 years, female
338.6
163_1
78 years, male
336.5
415_1
77 years, female
336.3
99_1
64 years, male
335.0
115_1
83 years, male
334.6
172_1
72 years, female
334.5
251_1
78 years, male
332.7
351_1
91 years, male
330.0
406_1
79 years, male
329.6
288_1
66 years, female
328.9
286_1
68 years, female
327.5
499_1
55 years, female
326.0
352_1
62 years, male
325.9
349_1
83 years, male
325.8
413_1
59 years, female
321.1
313_1
79 years, female
319.9
425_1
59 years, female
317.2
117_1
61 years, male
317.0
353_1
82 years, female
316.9
41_1
94 years, female
316.1
291_1
76 years, male
314.0
506_1
65 years, male
313.1
480_1
63 years, male
310.9
356_1
87 years, female
310.1
292_1
71 years, male
308.8
81_1
67 years, male
307.5
293_1
68 years, female
306.8
89_1
63 years, male
305.8
517_1
88 years, male
305.4
348_1
84 years, male
304.0
501_1
88 years, male
304.0
350_1
84 years, female
301.8
466_1
57 years, female
294.2
264_1
73 years, female
292.9
32_1
67 years, male
291.6
9_1
66 years, female
291.3
314_1
67 years, male
286.3
491_1
89 years, female
284.7
43_1
64 years, female
266.0
149_1
88 years, male
244.3
490_1
67 years, female
234.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.