HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:129.9 nTPM
HPA Brain:182.0 nTPM
GTEx:129.9 nTPM
FANTOM5:146.3 Scaled Tags Per Million
Pig:184.3 nTPM
Mouse:141.1 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030131Antibody HPA030132Antibody HPA030133Antibody HPA030134
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells LowHighLowMedium








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 182.0
Sample id Sample description nTPM
Hippocampus
nTPM: 121.9
1898 Male, age 80, left hemisphere 152.3
2148 Female, age 91, left hemisphere 131.0
2621 Female, age 67, right hemisphere 119.9
2529 Female, age 94, left hemisphere 119.6
1855 Male, age 76, left hemisphere 106.1
1911 Female, age 85, right hemisphere 102.7
Dentate gyrus
nTPM: 127.5
1927 Female, age 91, both hemispheres 158.6
2530 Female, age 94, left hemisphere 138.4
2010 Male, age 76, both hemispheres 125.0
2531 Female, age 67, both hemispheres 119.9
2528 Male, age 74, both hemispheres 118.2
2246 Female, age 85, both hemispheres 105.1
Entorhinal gyrus
nTPM: 150.9
2764 Male, age 80, right hemisphere 179.0
2613 Female, age 94, left hemisphere 167.5
1787 Male, age 76, left hemisphere 160.3
1938 Female, age 85, left hemisphere 156.0
2686 Male, age 75, right hemisphere 131.1
2117 Female, age 91, right hemisphere 111.8
Hippocampus, CA1
nTPM: 140.3
2749 Male, age 80, left hemisphere 224.9
2527 Male, age 74, both hemispheres 125.5
1873 Female, age 85, both hemispheres 122.6
2082 Female, age 91, right hemisphere 115.2
2045 Male, age 76, both hemispheres 113.1
Hippocampus, CA2
nTPM: 139.0
1892 Male, age 76, both hemispheres 179.5
1963 Male, age 80, left hemisphere 162.5
2437 Female, age 94, left hemisphere 131.9
2113 Female, age 91, right hemisphere 121.7
2249 Male, age 74, both hemispheres 119.6
1940 Female, age 85, left hemisphere 118.9
Hippocampus, CA3
nTPM: 136.5
2137 Male, age 80, left hemisphere 186.7
1867 Male, age 76, both hemispheres 149.2
2861 Female, age 67, both hemispheres 144.4
2436 Male, age 74, both hemispheres 120.2
2620 Female, age 94, left hemisphere 116.0
1891 Female, age 85, both hemispheres 102.5
Parahippocampal cortex
nTPM: 144.9
1850 Male, age 80, both hemispheres 181.1
1990 Female, age 91, right hemisphere 156.9
2532 Female, age 72, left hemisphere 155.8
2245 Female, age 91, both hemispheres 149.6
2622 Female, age 67, right hemisphere 147.7
1933 Female, age 85, both hemispheres 146.9
2693 Female, age 94, both hemispheres 133.1
2250 Female, age 67, right hemisphere 130.4
2692 Male, age 74, both hemispheres 125.5
2018 Male, age 76, both hemispheres 122.1
Perirhinal gyrus
nTPM: 182.0
1794 Male, age 80, right hemisphere 212.2
1847 Female, age 91, left hemisphere 202.8
1841 Female, age 85, right hemisphere 178.2
2521 Female, age 94, right hemisphere 161.8
2848 Male, age 76, right hemisphere 155.0
Subiculum
nTPM: 120.2
1977 Female, age 85, both hemispheres 141.0
1901 Male, age 80, both hemispheres 137.7
2619 Male, age 74, both hemispheres 122.9
2438 Female, age 94, left hemisphere 118.3
2729 Female, age 91, right hemisphere 106.0
2042 Male, age 76, both hemispheres 95.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 129.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 129.9
Samples: 197

Max nTPM: 302.1
Min nTPM: 30.9
Std nTPM: 46.1
Median nTPM: 125.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 302.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 276.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 262.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 249.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 236.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 233.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 227.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 224.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 222.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 215.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 204.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 146.3
FF:10169-103B7 60 years, female 173.4
FF:10153-102I9 76 years, female 119.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 184.3
Pig sample Sample description nTPM
Subiculum
nTPM: 128.6
Samples: 4

Max nTPM: 172.9
Min nTPM: 108.8
Sample A Female 172.9
Sample B Female 119.0
Sample C Male 113.8
Sample D Male 108.8
Dorsal hippocampus
nTPM: 184.4
Samples: 4

Max nTPM: 231.5
Min nTPM: 150.8
Sample A Female 231.5
Sample B Female 191.7
Sample C Male 150.8
Sample D Male 163.4
Entorhinal cortex
nTPM: 167.9
Samples: 4

Max nTPM: 184.1
Min nTPM: 153.6
Sample A Female 184.1
Sample B Female 177.7
Sample C Male 156.2
Sample D Male 153.6
Ventral hippocampus
nTPM: 153.4
Samples: 4

Max nTPM: 190.4
Min nTPM: 109.0
Sample A Female 148.7
Sample B Female 109.0
Sample C Male 165.6
Sample D Male 190.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 141.1
Samples: 4

Max nTPM: 148.8
Min nTPM: 137.2
Sample A Male 138.7
Sample B Male 148.8
Sample C Female 137.2
Sample D Female 139.7
Hippocampal formation
nTPM: 127.6
Samples: 4

Max nTPM: 132.8
Min nTPM: 125.3
Sample A Male 132.8
Sample B Male 125.3
Sample C Female 126.4
Sample D Female 125.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
68637491 Antisense, RP_050126_01_A06, Mouse strain C57BL/6J (56 days, male) 13.3

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