We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
138.6
nTPM
FANTOM5:
161.0
Scaled Tags Per Million
Pig:
152.7
nTPM
Allen mouse:
7.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
138.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 81.4
1984
Male, age 76, both hemispheres
99.5
2090
Male, age 80, both hemispheres
79.4
2188
Female, age 91, both hemispheres
77.9
2301
Female, age 85, both hemispheres
68.8
Dorsal cochlear nucleus nTPM: 91.7
2802
Male, age 74, right hemisphere
109.3
2370
Male, age 61, both hemispheres
91.9
2058
Male, age 76, both hemispheres
88.6
2187
Female, age 91, both hemispheres
85.6
2378
Male, age 80, both hemispheres
82.9
Dorsal tegmental nucleus nTPM: 85.3
2083
Male, age 80, both hemispheres
105.2
2326
Male, age 74, both hemispheres
84.6
2358
Male, age 61, both hemispheres
75.8
1936
Male, age 76, left hemisphere
75.4
Dorsolateral tegmental area nTPM: 86.6
2654
Male, age 80, both hemispheres
97.1
2141
Male, age 76, both hemispheres
96.2
2751
Female, age 85, both hemispheres
94.8
2360
Male, age 74, both hemispheres
82.2
2337
Male, age 61, both hemispheres
62.5
Kolliker-Fuse nucleus nTPM: 85.8
2163
Male, age 80, both hemispheres
101.4
2793
Female, age 91, left hemisphere
79.5
2315
Male, age 76, right hemisphere
76.5
Lateral lemniscal nuclei nTPM: 126.7
2169
Male, age 76, both hemispheres
168.0
2036
Male, age 80, both hemispheres
136.0
2746
Female, age 85, left hemisphere
129.0
2453
Male, age 74, right hemisphere
118.5
2320
Female, age 91, left hemisphere
81.8
Lateral parabrachial nucleus nTPM: 94.3
2139
Female, age 85, right hemisphere
140.6
2013
Male, age 80, both hemispheres
92.1
2790
Male, age 61, both hemispheres
90.7
2792
Male, age 76, both hemispheres
53.8
Lateral vestibular nucleus nTPM: 92.3
2184
Male, age 76, both hemispheres
97.2
2311
Male, age 80, both hemispheres
87.5
Locus coeruleus nTPM: 110.7
2123
Female, age 91, both hemispheres
128.3
2014
Male, age 55, unknown
119.0
2317
Female, age 72, unknown
114.1
2720
Male, age 74, both hemispheres
109.1
2162
Male, age 80, both hemispheres
103.2
2788
Male, age 74, unknown
101.3
1980
Male, age 76, both hemispheres
99.9
Medial parabrachial nucleus nTPM: 91.2
2463
Female, age 85, right hemisphere
98.3
2156
Male, age 61, both hemispheres
91.8
2854
Male, age 80, both hemispheres
91.8
2170
Female, age 91, both hemispheres
90.0
2786
Male, age 76, both hemispheres
84.1
Medial periolivary nuclei nTPM: 122.0
2063
Male, age 76, both hemispheres
186.7
2171
Female, age 85, both hemispheres
156.6
2791
Male, age 74, right hemisphere
103.9
2081
Male, age 80, both hemispheres
82.8
2458
Female, age 91, both hemispheres
80.0
Motor facial nucleus nTPM: 118.1
2062
Male, age 76, both hemispheres
202.9
2795
Female, age 91, both hemispheres
114.0
2365
Male, age 74, right hemisphere
110.3
2327
Male, age 80, both hemispheres
98.1
2697
Female, age 85, both hemispheres
94.8
2126
Male, age 61, both hemispheres
88.7
Motor trigeminal nucleus nTPM: 94.9
2079
Male, age 80, both hemispheres
112.2
2560
Male, age 74, both hemispheres
105.7
2309
Male, age 76, both hemispheres
94.1
2335
Male, age 61, both hemispheres
84.0
2321
Female, age 91, both hemispheres
78.2
Nuclei of the trapezoid body nTPM: 136.4
1983
Male, age 76, both hemispheres
184.3
2735
Female, age 85, both hemispheres
162.2
2159
Male, age 61, both hemispheres
138.9
2166
Male, age 80, both hemispheres
100.3
2368
Female, age 91, both hemispheres
96.3
Nucleus raphe magnus nTPM: 125.6
2172
Female, age 85, both hemispheres
158.5
2160
Male, age 61, both hemispheres
155.3
2455
Male, age 74, both hemispheres
123.3
2051
Male, age 76, both hemispheres
121.8
2328
Male, age 80, both hemispheres
102.8
2459
Female, age 91, both hemispheres
92.2
Paramedian reticular nucleus nTPM: 98.8
2050
Female, age 85, both hemispheres
128.8
2057
Male, age 80, both hemispheres
110.3
2313
Male, age 61, both hemispheres
91.3
2052
Male, age 76, both hemispheres
64.8
Pedunculopontine tegmental nucleus nTPM: 89.0
1921
Female, age 85, both hemispheres
100.2
2334
Male, age 80, both hemispheres
92.8
2338
Male, age 61, both hemispheres
74.1
Pontine nuclei nTPM: 138.6
2787
Female, age 85, both hemispheres
202.2
1863
Male, age 55, unknown
185.3
1968
Male, age 76, left hemisphere
174.3
2109
Female, age 72, unknown
141.1
2727
Male, age 61, right hemisphere
141.1
2454
Male, age 74, left hemisphere
94.0
2115
Male, age 80, left hemisphere
91.8
2319
Female, age 91, both hemispheres
78.9
Pontine raphe nucleus nTPM: 119.3
2122
Female, age 85, midline
143.1
2853
Male, age 76, midline
95.6
Posteroventral cochlear nucleus nTPM: 83.4
2752
Female, age 85, both hemispheres
109.6
2371
Male, age 61, both hemispheres
89.2
2070
Male, age 76, both hemispheres
88.3
2341
Male, age 80, both hemispheres
66.7
2135
Female, age 91, both hemispheres
63.4
Principal sensory trigeminal nucleus nTPM: 108.3
2158
Male, age 61, both hemispheres
144.6
2008
Male, age 80, left hemisphere
121.2
2324
Male, age 76, both hemispheres
88.9
2367
Female, age 91, left hemisphere
78.6
Reticular pontine nucleus, caudal nTPM: 104.2
2092
Male, age 76, both hemispheres
139.8
2332
Male, age 80, right hemisphere
111.3
2559
Male, age 74, both hemispheres
84.6
2457
Female, age 91, both hemispheres
81.2
Reticular pontine nucleus, oral nTPM: 99.0
2012
Female, age 85, both hemispheres
127.0
1939
Male, age 80, both hemispheres
100.5
2167
Male, age 76, both hemispheres
100.1
2361
Male, age 74, both hemispheres
90.6
2366
Female, age 91, both hemispheres
76.9
Reticulotegmental nucleus nTPM: 99.5
2325
Male, age 76, both hemispheres
126.0
2452
Male, age 74, both hemispheres
102.0
2333
Male, age 80, both hemispheres
87.1
2322
Female, age 91, both hemispheres
82.8
Spinal trigeminal nucleus, oral nTPM: 99.8
2737
Female, age 85, both hemispheres
102.6
1978
Male, age 76, both hemispheres
100.9
2164
Male, age 80, both hemispheres
95.8
Subcoeruleus area nTPM: 103.1
2089
Male, age 76, left hemisphere
128.2
2451
Male, age 74, both hemispheres
102.7
2323
Female, age 91, left hemisphere
102.0
1958
Male, age 80, both hemispheres
101.6
2369
Female, age 85, left hemisphere
81.2
Superior olive nTPM: 114.3
1875
Female, age 85, both hemispheres
155.7
2020
Male, age 76, both hemispheres
133.6
2364
Male, age 74, right hemisphere
99.6
2329
Male, age 80, right hemisphere
96.3
2561
Female, age 91, both hemispheres
86.1
Ventral periolivary nuclei nTPM: 116.0
2130
Female, age 85, both hemispheres
134.2
2165
Male, age 80, both hemispheres
124.6
2023
Male, age 76, both hemispheres
120.9
2794
Female, age 91, left hemisphere
84.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 102.7
1959
Male, age 76, both hemispheres
128.5
2449
Male, age 74, both hemispheres
114.0
2161
Male, age 80, both hemispheres
100.1
2840
Female, age 85, both hemispheres
97.9
2456
Female, age 91, both hemispheres
90.2
2359
Male, age 61, both hemispheres
85.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
152.7
Pig sample
Sample description
nTPM
Pons nTPM: 152.7
Samples: 4
Max nTPM: 243.2
Min nTPM: 98.4
Sample A
Female
243.2
Sample B
Female
98.4
Sample C
Male
107.6
Sample D
Male
161.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
