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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
55.2
nTPM
GTEx:
55.2
nTPM
FANTOM5:
844.1
Scaled Tags Per Million
Pig:
0.2
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
55.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 55.2
Samples: 105
Max nTPM: 267.7
Min nTPM: 3.9
Std nTPM: 51.6
Median nTPM: 0.0
321_1
62 years, female
267.7
2_1
77 years, female
229.6
353_1
82 years, female
202.4
316_1
62 years, male
184.9
350_1
84 years, female
180.3
354_1
81 years, female
173.1
320_1
89 years, female
163.7
4_1
88 years, female
156.0
218_1
71 years, female
133.4
452_1
88 years, female
132.7
319_1
81 years, male
127.9
506_1
65 years, male
124.7
351_1
91 years, male
108.8
480_1
63 years, male
105.9
356_1
87 years, female
102.9
163_1
78 years, male
100.8
349_1
83 years, male
98.6
404_1
82 years, female
94.5
322_1
76 years, male
89.6
377_1
82 years, female
86.5
352_1
62 years, male
85.8
394_1
75 years, female
84.2
295_1
61 years, female
82.7
355_1
70 years, female
79.3
173_1
67 years, male
79.0
177_1
74 years, male
77.6
293_1
68 years, female
76.2
406_1
79 years, male
74.2
384_1
83 years, male
72.8
376_1
75 years, female
69.5
317_1
60 years, male
69.1
318_1
68 years, male
63.8
386_1
76 years, male
58.9
6_1
73 years, female
56.0
243_1
75 years, male
55.4
518_1
75 years, female
52.2
292_1
71 years, male
50.9
517_1
88 years, male
48.0
308_1
70 years, female
47.8
99_1
64 years, male
46.1
251_1
78 years, male
44.9
503_1
68 years, male
44.8
172_1
72 years, female
44.2
17_1
71 years, male
43.8
115_1
83 years, male
43.8
264_1
73 years, female
43.3
266_1
85 years, male
43.2
396_1
62 years, male
41.8
389_1
86 years, female
41.4
18_1
88 years, male
41.3
307_1
66 years, female
40.0
286_1
68 years, female
38.7
405_1
91 years, male
38.7
9_1
66 years, female
37.1
425_1
59 years, female
36.9
335_1
73 years, female
36.0
145_1
84 years, male
35.7
311_1
78 years, male
34.7
189_1
76 years, male
34.2
447_1
81 years, male
33.4
495_1
57 years, female
33.0
291_1
76 years, male
31.7
35_1
74 years, female
30.9
237_1
82 years, male
30.8
375_1
74 years, female
30.5
501_1
88 years, male
28.8
379_1
60 years, male
27.2
348_1
84 years, male
25.8
120_1
70 years, female
25.6
42_1
85 years, male
24.2
526_1
61 years, male
24.1
41_1
94 years, female
22.4
139_1
64 years, female
22.4
109_1
81 years, female
22.3
265_1
87 years, male
21.7
347_1
72 years, male
21.6
153_1
70 years, female
20.9
126_1
63 years, male
20.4
324_1
76 years, male
19.4
499_1
55 years, female
18.7
119_1
70 years, female
18.2
491_1
89 years, female
17.8
142_1
61 years, female
17.7
117_1
61 years, male
17.4
468_1
89 years, male
17.4
314_1
67 years, male
14.2
254_1
77 years, female
13.8
313_1
79 years, female
13.5
81_1
67 years, male
13.1
288_1
66 years, female
13.0
490_1
67 years, female
12.6
89_1
63 years, male
12.4
43_1
64 years, female
11.9
466_1
57 years, female
11.7
137_1
83 years, male
11.5
229_1
69 years, female
10.6
315_1
62 years, female
10.3
217_1
76 years, male
10.1
246_1
77 years, male
10.0
162_1
79 years, female
9.1
414_1
84 years, female
8.8
149_1
88 years, male
6.6
32_1
67 years, male
6.3
415_1
77 years, female
5.7
413_1
59 years, female
3.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
