HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:199.4 nTPM
HPA Brain:220.1 nTPM
GTEx:199.4 nTPM
FANTOM5:374.0 Scaled Tags Per Million
Pig:162.0 nTPM
Mouse:65.3 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 220.1
Sample id Sample description nTPM
Hippocampus
nTPM: 195.4
2529 Female, age 94, left hemisphere 248.5
1855 Male, age 76, left hemisphere 215.5
2621 Female, age 67, right hemisphere 200.6
1898 Male, age 80, left hemisphere 195.5
1911 Female, age 85, right hemisphere 156.8
2148 Female, age 91, left hemisphere 155.3
Dentate gyrus
nTPM: 192.2
2530 Female, age 94, left hemisphere 273.2
2010 Male, age 76, both hemispheres 229.1
2246 Female, age 85, both hemispheres 191.1
2531 Female, age 67, both hemispheres 187.8
2528 Male, age 74, both hemispheres 167.2
1927 Female, age 91, both hemispheres 104.8
Entorhinal gyrus
nTPM: 220.1
2764 Male, age 80, right hemisphere 258.7
2686 Male, age 75, right hemisphere 244.6
1787 Male, age 76, left hemisphere 228.7
2117 Female, age 91, right hemisphere 217.8
2613 Female, age 94, left hemisphere 192.9
1938 Female, age 85, left hemisphere 178.1
Hippocampus, CA1
nTPM: 172.0
2045 Male, age 76, both hemispheres 214.1
2527 Male, age 74, both hemispheres 167.5
2749 Male, age 80, left hemisphere 164.9
1873 Female, age 85, both hemispheres 163.1
2082 Female, age 91, right hemisphere 150.5
Hippocampus, CA2
nTPM: 153.7
2437 Female, age 94, left hemisphere 205.6
1940 Female, age 85, left hemisphere 172.6
1892 Male, age 76, both hemispheres 159.8
2113 Female, age 91, right hemisphere 153.0
2249 Male, age 74, both hemispheres 138.7
1963 Male, age 80, left hemisphere 92.6
Hippocampus, CA3
nTPM: 171.1
2861 Female, age 67, both hemispheres 206.2
2620 Female, age 94, left hemisphere 192.9
1867 Male, age 76, both hemispheres 175.1
2137 Male, age 80, left hemisphere 162.7
1891 Female, age 85, both hemispheres 146.8
2436 Male, age 74, both hemispheres 142.9
Parahippocampal cortex
nTPM: 195.7
2245 Female, age 91, both hemispheres 239.8
2018 Male, age 76, both hemispheres 236.2
2532 Female, age 72, left hemisphere 219.1
1850 Male, age 80, both hemispheres 211.8
2622 Female, age 67, right hemisphere 206.9
2692 Male, age 74, both hemispheres 196.0
1990 Female, age 91, right hemisphere 184.6
1933 Female, age 85, both hemispheres 169.5
2250 Female, age 67, right hemisphere 149.7
2693 Female, age 94, both hemispheres 143.4
Perirhinal gyrus
nTPM: 192.8
1794 Male, age 80, right hemisphere 254.2
2848 Male, age 76, right hemisphere 188.6
1841 Female, age 85, right hemisphere 182.5
2521 Female, age 94, right hemisphere 169.4
1847 Female, age 91, left hemisphere 169.3
Subiculum
nTPM: 205.9
2042 Male, age 76, both hemispheres 257.8
2619 Male, age 74, both hemispheres 242.4
2438 Female, age 94, left hemisphere 214.8
1901 Male, age 80, both hemispheres 203.6
1977 Female, age 85, both hemispheres 188.2
2729 Female, age 91, right hemisphere 128.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 199.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 199.4
Samples: 197

Max nTPM: 528.2
Min nTPM: 74.4
Std nTPM: 65.4
Median nTPM: 188.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 528.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 454.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 438.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 362.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 354.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 350.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 346.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 340.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 330.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 320.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 317.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 374.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 374.0
FF:10169-103B7 60 years, female 431.0
FF:10153-102I9 76 years, female 317.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 162.0
Pig sample Sample description nTPM
Subiculum
nTPM: 148.9
Samples: 4

Max nTPM: 191.5
Min nTPM: 131.0
Sample A Female 191.5
Sample B Female 139.9
Sample C Male 131.0
Sample D Male 133.2
Dorsal hippocampus
nTPM: 161.8
Samples: 4

Max nTPM: 217.5
Min nTPM: 107.0
Sample A Female 217.5
Sample B Female 136.1
Sample C Male 186.5
Sample D Male 107.0
Entorhinal cortex
nTPM: 142.5
Samples: 4

Max nTPM: 181.3
Min nTPM: 112.8
Sample A Female 145.6
Sample B Female 130.2
Sample C Male 181.3
Sample D Male 112.8
Ventral hippocampus
nTPM: 162.0
Samples: 4

Max nTPM: 215.3
Min nTPM: 128.0
Sample A Female 164.9
Sample B Female 128.0
Sample C Male 215.3
Sample D Male 139.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 58.5
Min nTPM: 54.5
Sample A Male 58.5
Sample B Male 57.1
Sample C Female 54.5
Sample D Female 56.5
Hippocampal formation
nTPM: 65.3
Samples: 4

Max nTPM: 75.7
Min nTPM: 48.5
Sample A Male 63.8
Sample B Male 48.5
Sample C Female 73.1
Sample D Female 75.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68919880 Antisense, RP_050301_02_F11, Mouse strain C57BL/6J (56 days, male) 1.7

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