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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
351.1
nTPM
FANTOM5:
835.9
Scaled Tags Per Million
Pig:
206.4
nTPM
Allen mouse:
0.3
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
351.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 300.1
2301
Female, age 85, both hemispheres
433.4
2188
Female, age 91, both hemispheres
350.1
2090
Male, age 80, both hemispheres
241.1
1984
Male, age 76, both hemispheres
175.7
Dorsal cochlear nucleus nTPM: 231.6
2187
Female, age 91, both hemispheres
343.8
2802
Male, age 74, right hemisphere
239.1
2370
Male, age 61, both hemispheres
197.6
2378
Male, age 80, both hemispheres
193.3
2058
Male, age 76, both hemispheres
184.5
Dorsal tegmental nucleus nTPM: 280.9
2358
Male, age 61, both hemispheres
341.7
2083
Male, age 80, both hemispheres
274.7
2326
Male, age 74, both hemispheres
273.9
1936
Male, age 76, left hemisphere
233.3
Dorsolateral tegmental area nTPM: 273.9
2337
Male, age 61, both hemispheres
436.7
2751
Female, age 85, both hemispheres
277.8
2654
Male, age 80, both hemispheres
248.5
2141
Male, age 76, both hemispheres
227.1
2360
Male, age 74, both hemispheres
179.5
Kolliker-Fuse nucleus nTPM: 301.7
2793
Female, age 91, left hemisphere
373.3
2163
Male, age 80, both hemispheres
283.2
2315
Male, age 76, right hemisphere
248.6
Lateral lemniscal nuclei nTPM: 237.3
2320
Female, age 91, left hemisphere
286.5
2169
Male, age 76, both hemispheres
248.6
2036
Male, age 80, both hemispheres
239.2
2746
Female, age 85, left hemisphere
215.8
2453
Male, age 74, right hemisphere
196.6
Lateral parabrachial nucleus nTPM: 251.2
2792
Male, age 76, both hemispheres
328.3
2139
Female, age 85, right hemisphere
231.2
2790
Male, age 61, both hemispheres
230.8
2013
Male, age 80, both hemispheres
214.3
Lateral vestibular nucleus nTPM: 351.1
2311
Male, age 80, both hemispheres
392.6
2184
Male, age 76, both hemispheres
309.5
Locus coeruleus nTPM: 220.0
2720
Male, age 74, both hemispheres
285.4
2014
Male, age 55, unknown
255.2
2162
Male, age 80, both hemispheres
249.9
2317
Female, age 72, unknown
218.6
1980
Male, age 76, both hemispheres
191.9
2123
Female, age 91, both hemispheres
186.5
2788
Male, age 74, unknown
152.1
Medial parabrachial nucleus nTPM: 298.4
2170
Female, age 91, both hemispheres
440.3
2854
Male, age 80, both hemispheres
332.2
2156
Male, age 61, both hemispheres
262.2
2786
Male, age 76, both hemispheres
255.9
2463
Female, age 85, right hemisphere
201.1
Medial periolivary nuclei nTPM: 222.4
2458
Female, age 91, both hemispheres
255.8
2171
Female, age 85, both hemispheres
241.2
2791
Male, age 74, right hemisphere
211.2
2081
Male, age 80, both hemispheres
209.6
2063
Male, age 76, both hemispheres
194.2
Motor facial nucleus nTPM: 230.7
2697
Female, age 85, both hemispheres
324.4
2365
Male, age 74, right hemisphere
242.6
2126
Male, age 61, both hemispheres
229.1
2327
Male, age 80, both hemispheres
211.2
2795
Female, age 91, both hemispheres
203.9
2062
Male, age 76, both hemispheres
173.0
Motor trigeminal nucleus nTPM: 271.2
2335
Male, age 61, both hemispheres
331.1
2321
Female, age 91, both hemispheres
304.3
2560
Male, age 74, both hemispheres
263.4
2309
Male, age 76, both hemispheres
239.1
2079
Male, age 80, both hemispheres
217.9
Nuclei of the trapezoid body nTPM: 212.2
2166
Male, age 80, both hemispheres
248.9
1983
Male, age 76, both hemispheres
213.7
2159
Male, age 61, both hemispheres
205.5
2735
Female, age 85, both hemispheres
201.3
2368
Female, age 91, both hemispheres
191.8
Nucleus raphe magnus nTPM: 229.3
2051
Male, age 76, both hemispheres
280.1
2172
Female, age 85, both hemispheres
250.3
2455
Male, age 74, both hemispheres
245.6
2328
Male, age 80, both hemispheres
222.5
2459
Female, age 91, both hemispheres
200.7
2160
Male, age 61, both hemispheres
176.6
Paramedian reticular nucleus nTPM: 231.9
2050
Female, age 85, both hemispheres
263.2
2052
Male, age 76, both hemispheres
237.8
2313
Male, age 61, both hemispheres
225.0
2057
Male, age 80, both hemispheres
201.5
Pedunculopontine tegmental nucleus nTPM: 264.5
2338
Male, age 61, both hemispheres
368.6
2334
Male, age 80, both hemispheres
254.8
1921
Female, age 85, both hemispheres
170.1
Pontine nuclei nTPM: 254.6
2319
Female, age 91, both hemispheres
322.3
2787
Female, age 85, both hemispheres
302.3
2454
Male, age 74, left hemisphere
296.9
2109
Female, age 72, unknown
292.8
1863
Male, age 55, unknown
288.7
1968
Male, age 76, left hemisphere
213.1
2115
Male, age 80, left hemisphere
203.7
2727
Male, age 61, right hemisphere
116.6
Pontine raphe nucleus nTPM: 216.1
2853
Male, age 76, midline
225.2
2122
Female, age 85, midline
207.0
Posteroventral cochlear nucleus nTPM: 237.0
2135
Female, age 91, both hemispheres
301.5
2341
Male, age 80, both hemispheres
282.6
2371
Male, age 61, both hemispheres
221.8
2070
Male, age 76, both hemispheres
212.5
2752
Female, age 85, both hemispheres
166.6
Principal sensory trigeminal nucleus nTPM: 243.2
2367
Female, age 91, left hemisphere
302.4
2324
Male, age 76, both hemispheres
290.5
2158
Male, age 61, both hemispheres
203.7
2008
Male, age 80, left hemisphere
176.3
Reticular pontine nucleus, caudal nTPM: 280.7
2457
Female, age 91, both hemispheres
322.2
2559
Male, age 74, both hemispheres
314.4
2092
Male, age 76, both hemispheres
247.7
2332
Male, age 80, right hemisphere
238.6
Reticular pontine nucleus, oral nTPM: 289.5
2366
Female, age 91, both hemispheres
366.1
2361
Male, age 74, both hemispheres
304.8
2167
Male, age 76, both hemispheres
288.1
1939
Male, age 80, both hemispheres
251.5
2012
Female, age 85, both hemispheres
236.9
Reticulotegmental nucleus nTPM: 254.8
2322
Female, age 91, both hemispheres
276.4
2325
Male, age 76, both hemispheres
253.6
2452
Male, age 74, both hemispheres
248.2
2333
Male, age 80, both hemispheres
241.0
Spinal trigeminal nucleus, oral nTPM: 233.9
2164
Male, age 80, both hemispheres
320.8
1978
Male, age 76, both hemispheres
200.0
2737
Female, age 85, both hemispheres
180.9
Subcoeruleus area nTPM: 230.6
2369
Female, age 85, left hemisphere
284.6
1958
Male, age 80, both hemispheres
239.2
2451
Male, age 74, both hemispheres
212.5
2089
Male, age 76, left hemisphere
208.7
2323
Female, age 91, left hemisphere
208.3
Superior olive nTPM: 228.7
2329
Male, age 80, right hemisphere
244.8
2561
Female, age 91, both hemispheres
243.2
2364
Male, age 74, right hemisphere
240.9
2020
Male, age 76, both hemispheres
220.3
1875
Female, age 85, both hemispheres
194.5
Ventral periolivary nuclei nTPM: 218.3
2165
Male, age 80, both hemispheres
260.3
2023
Male, age 76, both hemispheres
217.8
2130
Female, age 85, both hemispheres
215.1
2794
Female, age 91, left hemisphere
180.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 251.6
2359
Male, age 61, both hemispheres
292.5
2840
Female, age 85, both hemispheres
292.0
2161
Male, age 80, both hemispheres
251.2
1959
Male, age 76, both hemispheres
231.4
2456
Female, age 91, both hemispheres
222.8
2449
Male, age 74, both hemispheres
219.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
206.4
Pig sample
Sample description
nTPM
Pons nTPM: 206.4
Samples: 4
Max nTPM: 259.7
Min nTPM: 133.6
Sample A
Female
207.9
Sample B
Female
133.6
Sample C
Male
224.5
Sample D
Male
259.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
