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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
166.7
nTPM
FANTOM5:
195.3
Scaled Tags Per Million
Pig:
60.9
nTPM
Allen mouse:
4.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
166.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 108.6
2301
Female, age 85, both hemispheres
137.2
2188
Female, age 91, both hemispheres
119.4
1984
Male, age 76, both hemispheres
93.6
2090
Male, age 80, both hemispheres
84.1
Dorsal cochlear nucleus nTPM: 112.9
2802
Male, age 74, right hemisphere
125.9
2187
Female, age 91, both hemispheres
120.1
2370
Male, age 61, both hemispheres
108.7
2058
Male, age 76, both hemispheres
108.5
2378
Male, age 80, both hemispheres
101.3
Dorsal tegmental nucleus nTPM: 107.6
2358
Male, age 61, both hemispheres
119.6
2083
Male, age 80, both hemispheres
116.6
1936
Male, age 76, left hemisphere
99.1
2326
Male, age 74, both hemispheres
95.3
Dorsolateral tegmental area nTPM: 93.7
2654
Male, age 80, both hemispheres
113.1
2141
Male, age 76, both hemispheres
109.3
2751
Female, age 85, both hemispheres
89.0
2337
Male, age 61, both hemispheres
85.0
2360
Male, age 74, both hemispheres
72.3
Kolliker-Fuse nucleus nTPM: 127.9
2793
Female, age 91, left hemisphere
164.9
2163
Male, age 80, both hemispheres
118.9
2315
Male, age 76, right hemisphere
99.9
Lateral lemniscal nuclei nTPM: 156.1
2169
Male, age 76, both hemispheres
216.8
2036
Male, age 80, both hemispheres
158.4
2320
Female, age 91, left hemisphere
143.4
2453
Male, age 74, right hemisphere
141.4
2746
Female, age 85, left hemisphere
120.5
Lateral parabrachial nucleus nTPM: 116.4
2139
Female, age 85, right hemisphere
140.1
2790
Male, age 61, both hemispheres
121.3
2013
Male, age 80, both hemispheres
107.6
2792
Male, age 76, both hemispheres
96.7
Lateral vestibular nucleus nTPM: 118.3
2184
Male, age 76, both hemispheres
118.7
2311
Male, age 80, both hemispheres
118.0
Locus coeruleus nTPM: 116.8
2720
Male, age 74, both hemispheres
124.3
2162
Male, age 80, both hemispheres
123.3
2317
Female, age 72, unknown
119.1
2788
Male, age 74, unknown
119.0
2014
Male, age 55, unknown
118.1
1980
Male, age 76, both hemispheres
108.9
2123
Female, age 91, both hemispheres
104.8
Medial parabrachial nucleus nTPM: 114.5
2854
Male, age 80, both hemispheres
128.4
2156
Male, age 61, both hemispheres
124.5
2170
Female, age 91, both hemispheres
120.0
2786
Male, age 76, both hemispheres
118.1
2463
Female, age 85, right hemisphere
81.6
Medial periolivary nuclei nTPM: 141.8
2063
Male, age 76, both hemispheres
199.9
2171
Female, age 85, both hemispheres
163.4
2458
Female, age 91, both hemispheres
131.4
2791
Male, age 74, right hemisphere
117.7
2081
Male, age 80, both hemispheres
96.7
Motor facial nucleus nTPM: 161.9
2062
Male, age 76, both hemispheres
201.6
2795
Female, age 91, both hemispheres
186.5
2327
Male, age 80, both hemispheres
183.0
2697
Female, age 85, both hemispheres
162.2
2365
Male, age 74, right hemisphere
135.7
2126
Male, age 61, both hemispheres
102.4
Motor trigeminal nucleus nTPM: 130.6
2560
Male, age 74, both hemispheres
137.2
2079
Male, age 80, both hemispheres
136.4
2309
Male, age 76, both hemispheres
129.3
2335
Male, age 61, both hemispheres
127.5
2321
Female, age 91, both hemispheres
122.9
Nuclei of the trapezoid body nTPM: 166.7
1983
Male, age 76, both hemispheres
192.1
2159
Male, age 61, both hemispheres
182.1
2735
Female, age 85, both hemispheres
162.1
2368
Female, age 91, both hemispheres
157.0
2166
Male, age 80, both hemispheres
140.3
Nucleus raphe magnus nTPM: 165.2
2172
Female, age 85, both hemispheres
192.7
2160
Male, age 61, both hemispheres
183.1
2051
Male, age 76, both hemispheres
173.0
2328
Male, age 80, both hemispheres
163.6
2455
Male, age 74, both hemispheres
144.7
2459
Female, age 91, both hemispheres
134.2
Paramedian reticular nucleus nTPM: 108.5
2050
Female, age 85, both hemispheres
125.1
2313
Male, age 61, both hemispheres
115.0
2057
Male, age 80, both hemispheres
111.0
2052
Male, age 76, both hemispheres
82.8
Pedunculopontine tegmental nucleus nTPM: 113.0
2334
Male, age 80, both hemispheres
114.5
2338
Male, age 61, both hemispheres
113.4
1921
Female, age 85, both hemispheres
111.2
Pontine nuclei nTPM: 148.6
1968
Male, age 76, left hemisphere
194.0
2787
Female, age 85, both hemispheres
191.5
1863
Male, age 55, unknown
183.8
2109
Female, age 72, unknown
142.3
2727
Male, age 61, right hemisphere
137.7
2319
Female, age 91, both hemispheres
116.5
2115
Male, age 80, left hemisphere
114.6
2454
Male, age 74, left hemisphere
108.6
Pontine raphe nucleus nTPM: 129.4
2122
Female, age 85, midline
131.1
2853
Male, age 76, midline
127.8
Posteroventral cochlear nucleus nTPM: 96.2
2752
Female, age 85, both hemispheres
107.7
2371
Male, age 61, both hemispheres
105.9
2070
Male, age 76, both hemispheres
103.7
2135
Female, age 91, both hemispheres
84.9
2341
Male, age 80, both hemispheres
78.7
Principal sensory trigeminal nucleus nTPM: 141.0
2158
Male, age 61, both hemispheres
178.2
2008
Male, age 80, left hemisphere
137.4
2367
Female, age 91, left hemisphere
132.3
2324
Male, age 76, both hemispheres
116.1
Reticular pontine nucleus, caudal nTPM: 142.9
2332
Male, age 80, right hemisphere
182.0
2092
Male, age 76, both hemispheres
165.0
2457
Female, age 91, both hemispheres
131.2
2559
Male, age 74, both hemispheres
93.4
Reticular pontine nucleus, oral nTPM: 118.4
2366
Female, age 91, both hemispheres
142.1
2361
Male, age 74, both hemispheres
122.8
2012
Female, age 85, both hemispheres
119.5
2167
Male, age 76, both hemispheres
111.7
1939
Male, age 80, both hemispheres
95.8
Reticulotegmental nucleus nTPM: 131.4
2325
Male, age 76, both hemispheres
159.7
2322
Female, age 91, both hemispheres
132.6
2333
Male, age 80, both hemispheres
117.1
2452
Male, age 74, both hemispheres
116.1
Spinal trigeminal nucleus, oral nTPM: 114.7
1978
Male, age 76, both hemispheres
143.1
2164
Male, age 80, both hemispheres
103.1
2737
Female, age 85, both hemispheres
97.9
Subcoeruleus area nTPM: 127.2
2089
Male, age 76, left hemisphere
176.0
1958
Male, age 80, both hemispheres
134.6
2323
Female, age 91, left hemisphere
132.5
2451
Male, age 74, both hemispheres
110.2
2369
Female, age 85, left hemisphere
82.7
Superior olive nTPM: 146.8
2020
Male, age 76, both hemispheres
164.1
2329
Male, age 80, right hemisphere
155.5
2561
Female, age 91, both hemispheres
155.5
1875
Female, age 85, both hemispheres
147.1
2364
Male, age 74, right hemisphere
111.5
Ventral periolivary nuclei nTPM: 160.4
2130
Female, age 85, both hemispheres
171.0
2165
Male, age 80, both hemispheres
165.2
2023
Male, age 76, both hemispheres
153.9
2794
Female, age 91, left hemisphere
151.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 133.6
1959
Male, age 76, both hemispheres
169.2
2161
Male, age 80, both hemispheres
141.3
2449
Male, age 74, both hemispheres
138.5
2456
Female, age 91, both hemispheres
125.6
2840
Female, age 85, both hemispheres
123.2
2359
Male, age 61, both hemispheres
104.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
60.9
Pig sample
Sample description
nTPM
Pons nTPM: 60.9
Samples: 4
Max nTPM: 109.3
Min nTPM: 39.2
Sample A
Female
109.3
Sample B
Female
42.7
Sample C
Male
39.2
Sample D
Male
52.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
