HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:309.9 nTPM
HPA Brain:368.2 nTPM
GTEx:309.9 nTPM
FANTOM5:256.6 Scaled Tags Per Million
Pig:143.0 nTPM
Mouse:256.7 nTPM
Allen mouse:14.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050883
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 368.2
Sample id Sample description nTPM
Hippocampus
nTPM: 326.0
2621 Female, age 67, right hemisphere 414.5
2148 Female, age 91, left hemisphere 376.5
1911 Female, age 85, right hemisphere 341.0
2529 Female, age 94, left hemisphere 280.6
1898 Male, age 80, left hemisphere 275.3
1855 Male, age 76, left hemisphere 267.9
Dentate gyrus
nTPM: 319.9
2531 Female, age 67, both hemispheres 396.8
1927 Female, age 91, both hemispheres 383.9
2530 Female, age 94, left hemisphere 341.5
2246 Female, age 85, both hemispheres 283.2
2528 Male, age 74, both hemispheres 258.2
2010 Male, age 76, both hemispheres 255.7
Entorhinal gyrus
nTPM: 202.8
2613 Female, age 94, left hemisphere 236.9
2686 Male, age 75, right hemisphere 212.4
1787 Male, age 76, left hemisphere 209.9
1938 Female, age 85, left hemisphere 206.4
2764 Male, age 80, right hemisphere 187.2
2117 Female, age 91, right hemisphere 164.1
Hippocampus, CA1
nTPM: 292.7
2749 Male, age 80, left hemisphere 366.5
1873 Female, age 85, both hemispheres 365.0
2527 Male, age 74, both hemispheres 299.6
2045 Male, age 76, both hemispheres 254.3
2082 Female, age 91, right hemisphere 178.3
Hippocampus, CA2
nTPM: 283.8
1963 Male, age 80, left hemisphere 470.3
1892 Male, age 76, both hemispheres 331.8
1940 Female, age 85, left hemisphere 269.7
2437 Female, age 94, left hemisphere 218.8
2113 Female, age 91, right hemisphere 212.2
2249 Male, age 74, both hemispheres 200.0
Hippocampus, CA3
nTPM: 368.2
2620 Female, age 94, left hemisphere 576.7
2861 Female, age 67, both hemispheres 490.5
2137 Male, age 80, left hemisphere 405.6
1867 Male, age 76, both hemispheres 268.9
1891 Female, age 85, both hemispheres 248.0
2436 Male, age 74, both hemispheres 219.5
Parahippocampal cortex
nTPM: 216.8
2245 Female, age 91, both hemispheres 336.3
2622 Female, age 67, right hemisphere 259.1
2250 Female, age 67, right hemisphere 224.7
2532 Female, age 72, left hemisphere 208.6
1933 Female, age 85, both hemispheres 206.4
2692 Male, age 74, both hemispheres 202.1
1850 Male, age 80, both hemispheres 200.9
2693 Female, age 94, both hemispheres 189.8
2018 Male, age 76, both hemispheres 176.7
1990 Female, age 91, right hemisphere 163.3
Perirhinal gyrus
nTPM: 213.6
1841 Female, age 85, right hemisphere 225.9
2521 Female, age 94, right hemisphere 224.5
1794 Male, age 80, right hemisphere 222.4
1847 Female, age 91, left hemisphere 215.4
2848 Male, age 76, right hemisphere 179.8
Subiculum
nTPM: 193.9
2042 Male, age 76, both hemispheres 216.7
1901 Male, age 80, both hemispheres 205.9
2729 Female, age 91, right hemisphere 199.5
2619 Male, age 74, both hemispheres 194.8
1977 Female, age 85, both hemispheres 175.7
2438 Female, age 94, left hemisphere 171.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 309.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 309.9
Samples: 197

Max nTPM: 755.4
Min nTPM: 28.1
Std nTPM: 144.5
Median nTPM: 299.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 755.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 727.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 723.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 718.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 686.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 620.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 617.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 589.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 574.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 557.5
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 556.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 256.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 256.6
FF:10169-103B7 60 years, female 277.3
FF:10153-102I9 76 years, female 235.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 143.0
Pig sample Sample description nTPM
Subiculum
nTPM: 121.3
Samples: 4

Max nTPM: 147.5
Min nTPM: 109.9
Sample A Female 147.5
Sample B Female 110.8
Sample C Male 117.0
Sample D Male 109.9
Dorsal hippocampus
nTPM: 135.1
Samples: 4

Max nTPM: 151.3
Min nTPM: 117.7
Sample A Female 151.3
Sample B Female 131.9
Sample C Male 117.7
Sample D Male 139.4
Entorhinal cortex
nTPM: 143.0
Samples: 4

Max nTPM: 158.6
Min nTPM: 125.4
Sample A Female 140.6
Sample B Female 125.4
Sample C Male 158.6
Sample D Male 147.5
Ventral hippocampus
nTPM: 114.0
Samples: 4

Max nTPM: 148.4
Min nTPM: 86.0
Sample A Female 86.0
Sample B Female 101.2
Sample C Male 120.2
Sample D Male 148.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 256.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 256.7
Samples: 4

Max nTPM: 263.3
Min nTPM: 250.3
Sample A Male 261.0
Sample B Male 250.3
Sample C Female 263.3
Sample D Female 252.2
Hippocampal formation
nTPM: 242.0
Samples: 4

Max nTPM: 272.4
Min nTPM: 221.8
Sample A Male 272.4
Sample B Male 229.2
Sample C Female 221.8
Sample D Female 244.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.3
71280844 Antisense, RP_050818_01_G01, Mouse strain C57BL/6J (56 days, male) 14.3

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