HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:526.0 nTPM
HPA Brain:208.8 nTPM
GTEx:526.0 nTPM
FANTOM5:406.1 Scaled Tags Per Million
Pig:86.7 nTPM
Mouse:773.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046647
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 208.8
Sample id Sample description nTPM
Hippocampus
nTPM: 176.2
1898 Male, age 80, left hemisphere 251.3
2529 Female, age 94, left hemisphere 181.2
1855 Male, age 76, left hemisphere 176.1
1911 Female, age 85, right hemisphere 156.6
2621 Female, age 67, right hemisphere 149.7
2148 Female, age 91, left hemisphere 142.1
Dentate gyrus
nTPM: 170.2
1927 Female, age 91, both hemispheres 213.5
2010 Male, age 76, both hemispheres 189.9
2530 Female, age 94, left hemisphere 173.1
2246 Female, age 85, both hemispheres 159.8
2528 Male, age 74, both hemispheres 155.8
2531 Female, age 67, both hemispheres 128.9
Entorhinal gyrus
nTPM: 153.5
1938 Female, age 85, left hemisphere 184.6
2764 Male, age 80, right hemisphere 175.5
1787 Male, age 76, left hemisphere 154.6
2117 Female, age 91, right hemisphere 145.7
2686 Male, age 75, right hemisphere 138.6
2613 Female, age 94, left hemisphere 122.0
Hippocampus, CA1
nTPM: 208.8
2749 Male, age 80, left hemisphere 327.9
1873 Female, age 85, both hemispheres 214.6
2527 Male, age 74, both hemispheres 184.1
2045 Male, age 76, both hemispheres 159.2
2082 Female, age 91, right hemisphere 158.2
Hippocampus, CA2
nTPM: 196.8
1892 Male, age 76, both hemispheres 261.5
1963 Male, age 80, left hemisphere 250.0
2249 Male, age 74, both hemispheres 223.0
2437 Female, age 94, left hemisphere 166.9
2113 Female, age 91, right hemisphere 141.4
1940 Female, age 85, left hemisphere 137.6
Hippocampus, CA3
nTPM: 179.1
2137 Male, age 80, left hemisphere 233.3
2436 Male, age 74, both hemispheres 227.6
1867 Male, age 76, both hemispheres 226.8
1891 Female, age 85, both hemispheres 175.0
2861 Female, age 67, both hemispheres 109.2
2620 Female, age 94, left hemisphere 102.4
Parahippocampal cortex
nTPM: 159.0
1850 Male, age 80, both hemispheres 210.7
2250 Female, age 67, right hemisphere 201.7
2018 Male, age 76, both hemispheres 185.3
1990 Female, age 91, right hemisphere 174.0
1933 Female, age 85, both hemispheres 172.0
2245 Female, age 91, both hemispheres 163.7
2693 Female, age 94, both hemispheres 136.2
2532 Female, age 72, left hemisphere 129.4
2692 Male, age 74, both hemispheres 122.7
2622 Female, age 67, right hemisphere 94.6
Perirhinal gyrus
nTPM: 186.2
1847 Female, age 91, left hemisphere 241.1
1841 Female, age 85, right hemisphere 196.6
1794 Male, age 80, right hemisphere 192.6
2521 Female, age 94, right hemisphere 154.2
2848 Male, age 76, right hemisphere 146.5
Subiculum
nTPM: 152.9
1901 Male, age 80, both hemispheres 194.7
1977 Female, age 85, both hemispheres 190.5
2042 Male, age 76, both hemispheres 158.0
2729 Female, age 91, right hemisphere 135.3
2619 Male, age 74, both hemispheres 127.4
2438 Female, age 94, left hemisphere 111.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 526.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 526.0
Samples: 197

Max nTPM: 1708.9
Min nTPM: 218.6
Std nTPM: 172.9
Median nTPM: 491.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1708.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1057.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1050.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 959.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 932.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 916.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 899.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 896.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 881.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 879.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 877.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 406.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 406.1
FF:10169-103B7 60 years, female 579.5
FF:10153-102I9 76 years, female 232.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.7
Pig sample Sample description nTPM
Subiculum
nTPM: 74.0
Samples: 4

Max nTPM: 95.8
Min nTPM: 65.1
Sample A Female 95.8
Sample B Female 68.7
Sample C Male 65.1
Sample D Male 66.5
Dorsal hippocampus
nTPM: 86.7
Samples: 4

Max nTPM: 111.3
Min nTPM: 62.2
Sample A Female 111.3
Sample B Female 81.6
Sample C Male 91.8
Sample D Male 62.2
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 87.7
Min nTPM: 61.5
Sample A Female 68.1
Sample B Female 87.7
Sample C Male 74.8
Sample D Male 61.5
Ventral hippocampus
nTPM: 74.7
Samples: 4

Max nTPM: 88.9
Min nTPM: 64.8
Sample A Female 88.9
Sample B Female 64.8
Sample C Male 71.4
Sample D Male 73.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 773.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 736.3
Samples: 4

Max nTPM: 815.2
Min nTPM: 679.5
Sample A Male 705.1
Sample B Male 745.3
Sample C Female 815.2
Sample D Female 679.5
Hippocampal formation
nTPM: 773.0
Samples: 4

Max nTPM: 901.6
Min nTPM: 701.3
Sample A Male 901.6
Sample B Male 701.3
Sample C Female 719.1
Sample D Female 769.9

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