HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:32.1 nTPM
HPA Brain:139.8 nTPM
GTEx:32.1 nTPM
FANTOM5:43.1 Scaled Tags Per Million
Pig:50.9 nTPM
Mouse:121.2 nTPM
Allen mouse:14.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042842Antibody CAB034278
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 139.8
Sample id Sample description nTPM
Hippocampus
nTPM: 54.6
1898 Male, age 80, left hemisphere 88.6
2529 Female, age 94, left hemisphere 57.2
1911 Female, age 85, right hemisphere 50.6
2621 Female, age 67, right hemisphere 49.3
1855 Male, age 76, left hemisphere 44.7
2148 Female, age 91, left hemisphere 37.2
Dentate gyrus
nTPM: 48.3
1927 Female, age 91, both hemispheres 63.4
2246 Female, age 85, both hemispheres 56.7
2530 Female, age 94, left hemisphere 56.2
2010 Male, age 76, both hemispheres 45.5
2528 Male, age 74, both hemispheres 34.9
2531 Female, age 67, both hemispheres 33.1
Entorhinal gyrus
nTPM: 139.8
2613 Female, age 94, left hemisphere 234.3
2764 Male, age 80, right hemisphere 159.9
2686 Male, age 75, right hemisphere 137.2
1787 Male, age 76, left hemisphere 116.5
1938 Female, age 85, left hemisphere 113.4
2117 Female, age 91, right hemisphere 77.5
Hippocampus, CA1
nTPM: 67.7
2749 Male, age 80, left hemisphere 120.2
2082 Female, age 91, right hemisphere 80.0
2527 Male, age 74, both hemispheres 67.1
1873 Female, age 85, both hemispheres 39.2
2045 Male, age 76, both hemispheres 31.8
Hippocampus, CA2
nTPM: 77.9
2437 Female, age 94, left hemisphere 108.9
1940 Female, age 85, left hemisphere 88.5
1892 Male, age 76, both hemispheres 85.0
2113 Female, age 91, right hemisphere 68.0
1963 Male, age 80, left hemisphere 67.6
2249 Male, age 74, both hemispheres 49.5
Hippocampus, CA3
nTPM: 59.3
2137 Male, age 80, left hemisphere 94.1
1867 Male, age 76, both hemispheres 86.4
1891 Female, age 85, both hemispheres 60.7
2436 Male, age 74, both hemispheres 52.6
2861 Female, age 67, both hemispheres 39.9
2620 Female, age 94, left hemisphere 22.2
Parahippocampal cortex
nTPM: 118.8
2622 Female, age 67, right hemisphere 152.2
2693 Female, age 94, both hemispheres 147.8
1990 Female, age 91, right hemisphere 136.4
1850 Male, age 80, both hemispheres 126.6
1933 Female, age 85, both hemispheres 121.0
2250 Female, age 67, right hemisphere 115.6
2245 Female, age 91, both hemispheres 109.7
2532 Female, age 72, left hemisphere 107.8
2692 Male, age 74, both hemispheres 95.2
2018 Male, age 76, both hemispheres 75.5
Perirhinal gyrus
nTPM: 136.7
1847 Female, age 91, left hemisphere 191.3
1794 Male, age 80, right hemisphere 149.1
2521 Female, age 94, right hemisphere 119.1
1841 Female, age 85, right hemisphere 116.8
2848 Male, age 76, right hemisphere 107.3
Subiculum
nTPM: 84.6
1977 Female, age 85, both hemispheres 120.8
2438 Female, age 94, left hemisphere 110.7
2619 Male, age 74, both hemispheres 106.7
1901 Male, age 80, both hemispheres 88.6
2729 Female, age 91, right hemisphere 41.3
2042 Male, age 76, both hemispheres 39.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.1
Samples: 197

Max nTPM: 118.1
Min nTPM: 0.4
Std nTPM: 28.1
Median nTPM: 22.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 118.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 112.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 108.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 106.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 103.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 102.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 94.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 93.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 90.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 87.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 86.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.1
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 34.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.9
Pig sample Sample description nTPM
Subiculum
nTPM: 50.9
Samples: 4

Max nTPM: 67.9
Min nTPM: 43.3
Sample A Female 67.9
Sample B Female 43.5
Sample C Male 49.0
Sample D Male 43.3
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 40.1
Min nTPM: 15.7
Sample A Female 40.1
Sample B Female 36.5
Sample C Male 36.6
Sample D Male 15.7
Entorhinal cortex
nTPM: 46.1
Samples: 4

Max nTPM: 55.3
Min nTPM: 38.8
Sample A Female 46.8
Sample B Female 38.8
Sample C Male 55.3
Sample D Male 43.4
Ventral hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 49.8
Min nTPM: 21.9
Sample A Female 31.5
Sample B Female 21.9
Sample C Male 49.8
Sample D Male 28.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.2
Samples: 4

Max nTPM: 139.2
Min nTPM: 108.4
Sample A Male 108.4
Sample B Male 139.2
Sample C Female 111.0
Sample D Female 126.2
Hippocampal formation
nTPM: 93.0
Samples: 4

Max nTPM: 106.2
Min nTPM: 81.7
Sample A Male 81.7
Sample B Male 100.4
Sample C Female 83.8
Sample D Female 106.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.3
1861 Antisense, RP_040526_02_E02, Mouse strain C57BL/6J (56 days, male) 14.3
1860 Antisense, RP_040526_02_E02, Mouse strain C57BL/6J (56 days, male) 7.0

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