We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
247.0
nTPM
FANTOM5:
150.8
Scaled Tags Per Million
Pig:
75.1
nTPM
Allen mouse:
10.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
247.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 71.4
1984
Male, age 76, both hemispheres
84.6
2301
Female, age 85, both hemispheres
78.9
2188
Female, age 91, both hemispheres
65.9
2090
Male, age 80, both hemispheres
56.1
Dorsal cochlear nucleus nTPM: 80.0
2058
Male, age 76, both hemispheres
114.0
2370
Male, age 61, both hemispheres
86.1
2187
Female, age 91, both hemispheres
85.4
2802
Male, age 74, right hemisphere
58.8
2378
Male, age 80, both hemispheres
55.6
Dorsal tegmental nucleus nTPM: 89.1
2083
Male, age 80, both hemispheres
107.0
1936
Male, age 76, left hemisphere
102.5
2358
Male, age 61, both hemispheres
89.2
2326
Male, age 74, both hemispheres
57.8
Dorsolateral tegmental area nTPM: 89.0
2141
Male, age 76, both hemispheres
142.3
2751
Female, age 85, both hemispheres
102.7
2654
Male, age 80, both hemispheres
99.2
2360
Male, age 74, both hemispheres
62.2
2337
Male, age 61, both hemispheres
38.6
Kolliker-Fuse nucleus nTPM: 76.4
2163
Male, age 80, both hemispheres
91.0
2793
Female, age 91, left hemisphere
82.3
2315
Male, age 76, right hemisphere
55.8
Lateral lemniscal nuclei nTPM: 138.5
2453
Male, age 74, right hemisphere
188.0
2036
Male, age 80, both hemispheres
150.0
2169
Male, age 76, both hemispheres
127.3
2746
Female, age 85, left hemisphere
127.1
2320
Female, age 91, left hemisphere
100.2
Lateral parabrachial nucleus nTPM: 99.6
2790
Male, age 61, both hemispheres
151.0
2139
Female, age 85, right hemisphere
140.4
2013
Male, age 80, both hemispheres
79.1
2792
Male, age 76, both hemispheres
28.1
Lateral vestibular nucleus nTPM: 84.6
2184
Male, age 76, both hemispheres
108.5
2311
Male, age 80, both hemispheres
60.8
Locus coeruleus nTPM: 247.0
2123
Female, age 91, both hemispheres
352.9
2720
Male, age 74, both hemispheres
288.5
1980
Male, age 76, both hemispheres
267.4
2162
Male, age 80, both hemispheres
222.5
2317
Female, age 72, unknown
221.8
2014
Male, age 55, unknown
214.1
2788
Male, age 74, unknown
161.6
Medial parabrachial nucleus nTPM: 99.2
2156
Male, age 61, both hemispheres
125.2
2786
Male, age 76, both hemispheres
100.3
2463
Female, age 85, right hemisphere
94.8
2170
Female, age 91, both hemispheres
90.4
2854
Male, age 80, both hemispheres
85.2
Medial periolivary nuclei nTPM: 130.0
2171
Female, age 85, both hemispheres
177.0
2063
Male, age 76, both hemispheres
161.6
2791
Male, age 74, right hemisphere
140.4
2458
Female, age 91, both hemispheres
92.5
2081
Male, age 80, both hemispheres
78.4
Motor facial nucleus nTPM: 141.0
2062
Male, age 76, both hemispheres
187.8
2365
Male, age 74, right hemisphere
155.2
2327
Male, age 80, both hemispheres
150.8
2126
Male, age 61, both hemispheres
121.6
2795
Female, age 91, both hemispheres
117.9
2697
Female, age 85, both hemispheres
112.5
Motor trigeminal nucleus nTPM: 115.9
2560
Male, age 74, both hemispheres
152.4
2079
Male, age 80, both hemispheres
125.5
2335
Male, age 61, both hemispheres
117.6
2309
Male, age 76, both hemispheres
92.2
2321
Female, age 91, both hemispheres
91.9
Nuclei of the trapezoid body nTPM: 164.1
2735
Female, age 85, both hemispheres
221.9
2159
Male, age 61, both hemispheres
205.3
1983
Male, age 76, both hemispheres
148.7
2166
Male, age 80, both hemispheres
125.6
2368
Female, age 91, both hemispheres
118.7
Nucleus raphe magnus nTPM: 169.1
2160
Male, age 61, both hemispheres
268.6
2172
Female, age 85, both hemispheres
203.7
2455
Male, age 74, both hemispheres
188.8
2328
Male, age 80, both hemispheres
135.5
2051
Male, age 76, both hemispheres
112.7
2459
Female, age 91, both hemispheres
105.2
Paramedian reticular nucleus nTPM: 146.4
2313
Male, age 61, both hemispheres
223.9
2050
Female, age 85, both hemispheres
153.7
2057
Male, age 80, both hemispheres
142.0
2052
Male, age 76, both hemispheres
65.9
Pedunculopontine tegmental nucleus nTPM: 116.2
1921
Female, age 85, both hemispheres
146.3
2334
Male, age 80, both hemispheres
132.8
2338
Male, age 61, both hemispheres
69.5
Pontine nuclei nTPM: 135.5
2727
Male, age 61, right hemisphere
213.4
2787
Female, age 85, both hemispheres
206.7
2109
Female, age 72, unknown
145.9
1968
Male, age 76, left hemisphere
132.8
1863
Male, age 55, unknown
129.2
2454
Male, age 74, left hemisphere
103.6
2115
Male, age 80, left hemisphere
92.5
2319
Female, age 91, both hemispheres
59.9
Pontine raphe nucleus nTPM: 168.3
2122
Female, age 85, midline
168.5
2853
Male, age 76, midline
168.0
Posteroventral cochlear nucleus nTPM: 68.3
2752
Female, age 85, both hemispheres
141.1
2070
Male, age 76, both hemispheres
95.6
2371
Male, age 61, both hemispheres
77.9
2341
Male, age 80, both hemispheres
18.2
2135
Female, age 91, both hemispheres
8.6
Principal sensory trigeminal nucleus nTPM: 141.4
2158
Male, age 61, both hemispheres
245.3
2008
Male, age 80, left hemisphere
152.2
2324
Male, age 76, both hemispheres
93.4
2367
Female, age 91, left hemisphere
74.7
Reticular pontine nucleus, caudal nTPM: 109.4
2332
Male, age 80, right hemisphere
162.4
2092
Male, age 76, both hemispheres
108.4
2457
Female, age 91, both hemispheres
88.7
2559
Male, age 74, both hemispheres
78.1
Reticular pontine nucleus, oral nTPM: 109.2
2012
Female, age 85, both hemispheres
139.7
2361
Male, age 74, both hemispheres
119.4
2167
Male, age 76, both hemispheres
110.8
1939
Male, age 80, both hemispheres
106.6
2366
Female, age 91, both hemispheres
69.3
Reticulotegmental nucleus nTPM: 121.0
2325
Male, age 76, both hemispheres
156.4
2452
Male, age 74, both hemispheres
139.2
2333
Male, age 80, both hemispheres
107.1
2322
Female, age 91, both hemispheres
81.2
Spinal trigeminal nucleus, oral nTPM: 100.1
2737
Female, age 85, both hemispheres
110.5
2164
Male, age 80, both hemispheres
97.0
1978
Male, age 76, both hemispheres
92.9
Subcoeruleus area nTPM: 122.9
2323
Female, age 91, left hemisphere
173.3
2089
Male, age 76, left hemisphere
127.4
2451
Male, age 74, both hemispheres
121.6
1958
Male, age 80, both hemispheres
119.1
2369
Female, age 85, left hemisphere
72.9
Superior olive nTPM: 128.3
1875
Female, age 85, both hemispheres
163.6
2329
Male, age 80, right hemisphere
129.0
2364
Male, age 74, right hemisphere
121.9
2561
Female, age 91, both hemispheres
121.7
2020
Male, age 76, both hemispheres
105.3
Ventral periolivary nuclei nTPM: 137.6
2130
Female, age 85, both hemispheres
164.5
2165
Male, age 80, both hemispheres
159.4
2794
Female, age 91, left hemisphere
129.1
2023
Male, age 76, both hemispheres
97.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 124.6
2449
Male, age 74, both hemispheres
174.3
2359
Male, age 61, both hemispheres
156.1
2161
Male, age 80, both hemispheres
121.9
1959
Male, age 76, both hemispheres
120.1
2456
Female, age 91, both hemispheres
92.3
2840
Female, age 85, both hemispheres
82.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
75.1
Pig sample
Sample description
nTPM
Pons nTPM: 75.1
Samples: 4
Max nTPM: 129.2
Min nTPM: 39.9
Sample A
Female
129.2
Sample B
Female
68.0
Sample C
Male
63.1
Sample D
Male
39.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
