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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
75.8
nTPM
FANTOM5:
53.7
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
75.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 41.1
2090
Male, age 80, both hemispheres
42.2
1984
Male, age 76, both hemispheres
41.7
2301
Female, age 85, both hemispheres
40.6
2188
Female, age 91, both hemispheres
39.7
Dorsal cochlear nucleus nTPM: 44.6
2058
Male, age 76, both hemispheres
59.4
2802
Male, age 74, right hemisphere
52.8
2378
Male, age 80, both hemispheres
38.3
2370
Male, age 61, both hemispheres
36.8
2187
Female, age 91, both hemispheres
35.8
Dorsal tegmental nucleus nTPM: 48.4
2358
Male, age 61, both hemispheres
73.0
1936
Male, age 76, left hemisphere
42.1
2083
Male, age 80, both hemispheres
40.4
2326
Male, age 74, both hemispheres
38.0
Dorsolateral tegmental area nTPM: 40.0
2337
Male, age 61, both hemispheres
48.9
2654
Male, age 80, both hemispheres
42.7
2141
Male, age 76, both hemispheres
42.3
2360
Male, age 74, both hemispheres
39.0
2751
Female, age 85, both hemispheres
26.9
Kolliker-Fuse nucleus nTPM: 57.1
2163
Male, age 80, both hemispheres
65.0
2315
Male, age 76, right hemisphere
62.5
2793
Female, age 91, left hemisphere
43.7
Lateral lemniscal nuclei nTPM: 57.1
2746
Female, age 85, left hemisphere
69.5
2036
Male, age 80, both hemispheres
60.9
2169
Male, age 76, both hemispheres
60.1
2453
Male, age 74, right hemisphere
58.0
2320
Female, age 91, left hemisphere
37.0
Lateral parabrachial nucleus nTPM: 58.8
2139
Female, age 85, right hemisphere
74.8
2790
Male, age 61, both hemispheres
60.3
2013
Male, age 80, both hemispheres
56.9
2792
Male, age 76, both hemispheres
43.2
Lateral vestibular nucleus nTPM: 46.3
2184
Male, age 76, both hemispheres
52.1
2311
Male, age 80, both hemispheres
40.4
Locus coeruleus nTPM: 65.1
2014
Male, age 55, unknown
82.4
2123
Female, age 91, both hemispheres
79.5
2788
Male, age 74, unknown
67.0
2720
Male, age 74, both hemispheres
65.9
1980
Male, age 76, both hemispheres
60.7
2317
Female, age 72, unknown
53.5
2162
Male, age 80, both hemispheres
47.0
Medial parabrachial nucleus nTPM: 46.0
2156
Male, age 61, both hemispheres
66.9
2854
Male, age 80, both hemispheres
53.3
2786
Male, age 76, both hemispheres
42.8
2170
Female, age 91, both hemispheres
38.5
2463
Female, age 85, right hemisphere
28.4
Medial periolivary nuclei nTPM: 63.6
2171
Female, age 85, both hemispheres
100.0
2063
Male, age 76, both hemispheres
69.3
2791
Male, age 74, right hemisphere
55.1
2081
Male, age 80, both hemispheres
53.4
2458
Female, age 91, both hemispheres
40.0
Motor facial nucleus nTPM: 58.1
2062
Male, age 76, both hemispheres
74.0
2327
Male, age 80, both hemispheres
66.3
2697
Female, age 85, both hemispheres
64.7
2365
Male, age 74, right hemisphere
56.8
2126
Male, age 61, both hemispheres
43.4
2795
Female, age 91, both hemispheres
43.3
Motor trigeminal nucleus nTPM: 49.9
2079
Male, age 80, both hemispheres
71.8
2560
Male, age 74, both hemispheres
48.1
2309
Male, age 76, both hemispheres
47.5
2335
Male, age 61, both hemispheres
44.2
2321
Female, age 91, both hemispheres
38.0
Nuclei of the trapezoid body nTPM: 72.0
2735
Female, age 85, both hemispheres
102.0
2159
Male, age 61, both hemispheres
86.1
1983
Male, age 76, both hemispheres
71.2
2166
Male, age 80, both hemispheres
60.9
2368
Female, age 91, both hemispheres
39.8
Nucleus raphe magnus nTPM: 74.8
2160
Male, age 61, both hemispheres
107.2
2172
Female, age 85, both hemispheres
104.5
2051
Male, age 76, both hemispheres
66.3
2455
Male, age 74, both hemispheres
66.1
2328
Male, age 80, both hemispheres
62.0
2459
Female, age 91, both hemispheres
42.7
Paramedian reticular nucleus nTPM: 54.2
2050
Female, age 85, both hemispheres
72.1
2052
Male, age 76, both hemispheres
51.1
2057
Male, age 80, both hemispheres
50.9
2313
Male, age 61, both hemispheres
42.6
Pedunculopontine tegmental nucleus nTPM: 45.0
2338
Male, age 61, both hemispheres
55.1
2334
Male, age 80, both hemispheres
44.6
1921
Female, age 85, both hemispheres
35.3
Pontine nuclei nTPM: 75.8
2787
Female, age 85, both hemispheres
114.6
2727
Male, age 61, right hemisphere
105.3
1863
Male, age 55, unknown
97.0
2109
Female, age 72, unknown
79.6
1968
Male, age 76, left hemisphere
66.9
2115
Male, age 80, left hemisphere
58.1
2454
Male, age 74, left hemisphere
42.8
2319
Female, age 91, both hemispheres
41.8
Pontine raphe nucleus nTPM: 56.1
2122
Female, age 85, midline
72.4
2853
Male, age 76, midline
39.9
Posteroventral cochlear nucleus nTPM: 41.3
2070
Male, age 76, both hemispheres
53.3
2752
Female, age 85, both hemispheres
51.3
2341
Male, age 80, both hemispheres
37.3
2371
Male, age 61, both hemispheres
34.8
2135
Female, age 91, both hemispheres
30.0
Principal sensory trigeminal nucleus nTPM: 66.0
2158
Male, age 61, both hemispheres
91.3
2008
Male, age 80, left hemisphere
83.4
2324
Male, age 76, both hemispheres
49.6
2367
Female, age 91, left hemisphere
39.6
Reticular pontine nucleus, caudal nTPM: 50.8
2332
Male, age 80, right hemisphere
67.5
2092
Male, age 76, both hemispheres
58.8
2457
Female, age 91, both hemispheres
39.7
2559
Male, age 74, both hemispheres
37.3
Reticular pontine nucleus, oral nTPM: 43.1
2012
Female, age 85, both hemispheres
60.8
2361
Male, age 74, both hemispheres
49.3
1939
Male, age 80, both hemispheres
37.4
2366
Female, age 91, both hemispheres
35.2
2167
Male, age 76, both hemispheres
32.6
Reticulotegmental nucleus nTPM: 43.9
2325
Male, age 76, both hemispheres
50.9
2333
Male, age 80, both hemispheres
45.5
2452
Male, age 74, both hemispheres
41.2
2322
Female, age 91, both hemispheres
38.0
Spinal trigeminal nucleus, oral nTPM: 70.5
2737
Female, age 85, both hemispheres
108.8
2164
Male, age 80, both hemispheres
56.0
1978
Male, age 76, both hemispheres
46.8
Subcoeruleus area nTPM: 44.6
1958
Male, age 80, both hemispheres
58.5
2089
Male, age 76, left hemisphere
51.6
2323
Female, age 91, left hemisphere
48.3
2451
Male, age 74, both hemispheres
41.9
2369
Female, age 85, left hemisphere
22.7
Superior olive nTPM: 60.5
1875
Female, age 85, both hemispheres
91.7
2329
Male, age 80, right hemisphere
57.5
2364
Male, age 74, right hemisphere
54.2
2020
Male, age 76, both hemispheres
52.9
2561
Female, age 91, both hemispheres
46.2
Ventral periolivary nuclei nTPM: 69.8
2130
Female, age 85, both hemispheres
91.9
2165
Male, age 80, both hemispheres
77.5
2794
Female, age 91, left hemisphere
56.7
2023
Male, age 76, both hemispheres
52.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 51.9
2161
Male, age 80, both hemispheres
60.5
2449
Male, age 74, both hemispheres
59.2
2840
Female, age 85, both hemispheres
57.6
1959
Male, age 76, both hemispheres
56.5
2359
Male, age 61, both hemispheres
43.7
2456
Female, age 91, both hemispheres
34.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
