HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:456.1 nTPM
HPA Brain:538.0 nTPM
GTEx:456.1 nTPM
FANTOM5:715.2 Scaled Tags Per Million
Pig:370.8 nTPM
Mouse:837.2 nTPM
Allen mouse:21.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003482
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 538.0
Sample id Sample description nTPM
Hippocampus
nTPM: 435.6
1898 Male, age 80, left hemisphere 580.8
2621 Female, age 67, right hemisphere 462.4
2148 Female, age 91, left hemisphere 454.9
1855 Male, age 76, left hemisphere 432.0
2529 Female, age 94, left hemisphere 349.3
1911 Female, age 85, right hemisphere 334.4
Dentate gyrus
nTPM: 464.2
1927 Female, age 91, both hemispheres 596.3
2530 Female, age 94, left hemisphere 535.1
2010 Male, age 76, both hemispheres 474.9
2531 Female, age 67, both hemispheres 419.9
2246 Female, age 85, both hemispheres 415.6
2528 Male, age 74, both hemispheres 343.5
Entorhinal gyrus
nTPM: 458.8
2764 Male, age 80, right hemisphere 554.6
2613 Female, age 94, left hemisphere 537.4
1938 Female, age 85, left hemisphere 487.6
1787 Male, age 76, left hemisphere 429.5
2686 Male, age 75, right hemisphere 400.7
2117 Female, age 91, right hemisphere 343.2
Hippocampus, CA1
nTPM: 521.9
2749 Male, age 80, left hemisphere 880.0
1873 Female, age 85, both hemispheres 497.3
2045 Male, age 76, both hemispheres 431.1
2527 Male, age 74, both hemispheres 414.4
2082 Female, age 91, right hemisphere 386.8
Hippocampus, CA2
nTPM: 461.4
1963 Male, age 80, left hemisphere 626.8
1892 Male, age 76, both hemispheres 615.5
2437 Female, age 94, left hemisphere 449.3
2113 Female, age 91, right hemisphere 367.7
1940 Female, age 85, left hemisphere 366.0
2249 Male, age 74, both hemispheres 343.2
Hippocampus, CA3
nTPM: 493.8
2137 Male, age 80, left hemisphere 670.9
2620 Female, age 94, left hemisphere 527.1
1867 Male, age 76, both hemispheres 493.9
2861 Female, age 67, both hemispheres 493.2
2436 Male, age 74, both hemispheres 396.0
1891 Female, age 85, both hemispheres 381.6
Parahippocampal cortex
nTPM: 436.6
1850 Male, age 80, both hemispheres 587.2
1990 Female, age 91, right hemisphere 481.5
2245 Female, age 91, both hemispheres 463.8
2693 Female, age 94, both hemispheres 434.8
1933 Female, age 85, both hemispheres 431.3
2532 Female, age 72, left hemisphere 421.9
2018 Male, age 76, both hemispheres 393.7
2692 Male, age 74, both hemispheres 388.7
2622 Female, age 67, right hemisphere 386.8
2250 Female, age 67, right hemisphere 376.5
Perirhinal gyrus
nTPM: 538.0
1847 Female, age 91, left hemisphere 658.4
1794 Male, age 80, right hemisphere 599.1
1841 Female, age 85, right hemisphere 512.9
2521 Female, age 94, right hemisphere 463.3
2848 Male, age 76, right hemisphere 456.3
Subiculum
nTPM: 395.0
1901 Male, age 80, both hemispheres 472.6
1977 Female, age 85, both hemispheres 453.7
2438 Female, age 94, left hemisphere 402.1
2619 Male, age 74, both hemispheres 377.7
2042 Male, age 76, both hemispheres 341.6
2729 Female, age 91, right hemisphere 322.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 456.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 456.1
Samples: 197

Max nTPM: 999.5
Min nTPM: 118.5
Std nTPM: 187.9
Median nTPM: 434.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 999.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 958.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 957.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 922.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 901.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 866.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 832.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 824.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 823.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 822.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 821.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 715.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 715.2
FF:10169-103B7 60 years, female 909.7
FF:10153-102I9 76 years, female 520.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 370.8
Pig sample Sample description nTPM
Subiculum
nTPM: 312.6
Samples: 4

Max nTPM: 409.8
Min nTPM: 267.6
Sample A Female 409.8
Sample B Female 283.0
Sample C Male 290.0
Sample D Male 267.6
Dorsal hippocampus
nTPM: 342.3
Samples: 4

Max nTPM: 411.7
Min nTPM: 300.7
Sample A Female 411.7
Sample B Female 337.4
Sample C Male 319.4
Sample D Male 300.7
Entorhinal cortex
nTPM: 370.8
Samples: 4

Max nTPM: 413.1
Min nTPM: 335.0
Sample A Female 400.1
Sample B Female 413.1
Sample C Male 335.0
Sample D Male 335.0
Ventral hippocampus
nTPM: 315.8
Samples: 4

Max nTPM: 351.1
Min nTPM: 238.2
Sample A Female 348.4
Sample B Female 238.2
Sample C Male 351.1
Sample D Male 325.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 837.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 778.9
Samples: 4

Max nTPM: 792.2
Min nTPM: 766.4
Sample A Male 766.6
Sample B Male 792.2
Sample C Female 790.5
Sample D Female 766.4
Hippocampal formation
nTPM: 837.3
Samples: 4

Max nTPM: 856.6
Min nTPM: 811.5
Sample A Male 856.6
Sample B Male 830.7
Sample C Female 850.3
Sample D Female 811.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.9
68563043 Antisense, RP_050125_01_A05, Mouse strain C57BL/6J (56 days, male) 26.6
70302222 Antisense, RP_050607_03_H03, Mouse strain C57BL/6J (56 days, male) 17.3

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