HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:136.7 nTPM
HPA Brain:638.0 nTPM
GTEx:136.7 nTPM
FANTOM5:882.9 Scaled Tags Per Million
Pig:280.3 nTPM
Mouse:323.6 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 638.0
Sample id Sample description nTPM
Hippocampus
nTPM: 527.2
2621 Female, age 67, right hemisphere 607.2
1855 Male, age 76, left hemisphere 559.6
2529 Female, age 94, left hemisphere 553.6
1898 Male, age 80, left hemisphere 535.7
2148 Female, age 91, left hemisphere 465.3
1911 Female, age 85, right hemisphere 441.7
Dentate gyrus
nTPM: 537.6
2530 Female, age 94, left hemisphere 748.6
2010 Male, age 76, both hemispheres 558.1
2246 Female, age 85, both hemispheres 512.4
2531 Female, age 67, both hemispheres 502.6
1927 Female, age 91, both hemispheres 478.6
2528 Male, age 74, both hemispheres 425.1
Entorhinal gyrus
nTPM: 622.8
2613 Female, age 94, left hemisphere 744.3
2764 Male, age 80, right hemisphere 703.4
2686 Male, age 75, right hemisphere 604.8
1938 Female, age 85, left hemisphere 602.0
1787 Male, age 76, left hemisphere 596.5
2117 Female, age 91, right hemisphere 485.8
Hippocampus, CA1
nTPM: 560.8
2749 Male, age 80, left hemisphere 829.7
2527 Male, age 74, both hemispheres 522.5
1873 Female, age 85, both hemispheres 517.2
2045 Male, age 76, both hemispheres 491.0
2082 Female, age 91, right hemisphere 443.6
Hippocampus, CA2
nTPM: 533.8
2437 Female, age 94, left hemisphere 619.6
1892 Male, age 76, both hemispheres 595.6
1963 Male, age 80, left hemisphere 586.4
1940 Female, age 85, left hemisphere 500.6
2249 Male, age 74, both hemispheres 451.0
2113 Female, age 91, right hemisphere 449.6
Hippocampus, CA3
nTPM: 518.6
2861 Female, age 67, both hemispheres 625.3
2137 Male, age 80, left hemisphere 607.1
2620 Female, age 94, left hemisphere 569.8
1867 Male, age 76, both hemispheres 512.8
1891 Female, age 85, both hemispheres 424.7
2436 Male, age 74, both hemispheres 372.1
Parahippocampal cortex
nTPM: 593.9
2622 Female, age 67, right hemisphere 705.2
2245 Female, age 91, both hemispheres 661.2
2532 Female, age 72, left hemisphere 650.3
1850 Male, age 80, both hemispheres 642.8
2692 Male, age 74, both hemispheres 578.4
2693 Female, age 94, both hemispheres 573.9
1933 Female, age 85, both hemispheres 552.4
1990 Female, age 91, right hemisphere 551.0
2018 Male, age 76, both hemispheres 540.4
2250 Female, age 67, right hemisphere 483.7
Perirhinal gyrus
nTPM: 638.0
1794 Male, age 80, right hemisphere 703.6
1847 Female, age 91, left hemisphere 673.2
1841 Female, age 85, right hemisphere 630.6
2521 Female, age 94, right hemisphere 605.0
2848 Male, age 76, right hemisphere 577.4
Subiculum
nTPM: 536.2
2438 Female, age 94, left hemisphere 689.9
1977 Female, age 85, both hemispheres 574.5
2619 Male, age 74, both hemispheres 547.1
1901 Male, age 80, both hemispheres 525.7
2042 Male, age 76, both hemispheres 476.7
2729 Female, age 91, right hemisphere 403.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 136.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 136.7
Samples: 197

Max nTPM: 322.5
Min nTPM: 28.1
Std nTPM: 51.2
Median nTPM: 129.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 322.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 304.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 282.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 261.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 251.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 247.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 239.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 239.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 236.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 232.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 231.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 882.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 882.9
FF:10169-103B7 60 years, female 992.8
FF:10153-102I9 76 years, female 773.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 280.3
Pig sample Sample description nTPM
Subiculum
nTPM: 280.3
Samples: 4

Max nTPM: 385.0
Min nTPM: 214.3
Sample A Female 385.0
Sample B Female 250.0
Sample C Male 271.8
Sample D Male 214.3
Dorsal hippocampus
nTPM: 238.0
Samples: 4

Max nTPM: 300.5
Min nTPM: 162.3
Sample A Female 300.5
Sample B Female 239.2
Sample C Male 249.8
Sample D Male 162.3
Entorhinal cortex
nTPM: 276.7
Samples: 4

Max nTPM: 297.4
Min nTPM: 248.7
Sample A Female 297.4
Sample B Female 248.7
Sample C Male 286.9
Sample D Male 273.7
Ventral hippocampus
nTPM: 258.5
Samples: 4

Max nTPM: 340.4
Min nTPM: 180.6
Sample A Female 242.0
Sample B Female 180.6
Sample C Male 340.4
Sample D Male 271.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 323.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 323.6
Samples: 4

Max nTPM: 397.1
Min nTPM: 288.5
Sample A Male 318.2
Sample B Male 290.4
Sample C Female 288.5
Sample D Female 397.1
Hippocampal formation
nTPM: 234.4
Samples: 4

Max nTPM: 245.6
Min nTPM: 223.2
Sample A Male 223.4
Sample B Male 245.6
Sample C Female 245.2
Sample D Female 223.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
69735759 Antisense, RP_050503_03_E02, Mouse strain C57BL/6J (56 days, male) 18.4
74513872 Antisense, RP_060208_01_E12, Mouse strain C57BL/6J (56 days, male) 8.3

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