HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:71.6 nTPM
HPA Brain:64.3 nTPM
GTEx:71.6 nTPM
FANTOM5:89.5 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:27.3 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049276
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.3
Sample id Sample description nTPM
Hippocampus
nTPM: 53.9
1898 Male, age 80, left hemisphere 61.4
2529 Female, age 94, left hemisphere 58.0
1855 Male, age 76, left hemisphere 53.6
2148 Female, age 91, left hemisphere 51.7
2621 Female, age 67, right hemisphere 49.7
1911 Female, age 85, right hemisphere 49.1
Dentate gyrus
nTPM: 53.1
2530 Female, age 94, left hemisphere 66.2
1927 Female, age 91, both hemispheres 53.5
2010 Male, age 76, both hemispheres 53.4
2246 Female, age 85, both hemispheres 51.5
2528 Male, age 74, both hemispheres 50.9
2531 Female, age 67, both hemispheres 43.3
Entorhinal gyrus
nTPM: 52.9
1938 Female, age 85, left hemisphere 61.6
1787 Male, age 76, left hemisphere 60.5
2117 Female, age 91, right hemisphere 59.2
2764 Male, age 80, right hemisphere 57.0
2613 Female, age 94, left hemisphere 42.7
2686 Male, age 75, right hemisphere 36.3
Hippocampus, CA1
nTPM: 59.4
2749 Male, age 80, left hemisphere 79.4
2527 Male, age 74, both hemispheres 68.7
1873 Female, age 85, both hemispheres 52.7
2082 Female, age 91, right hemisphere 48.5
2045 Male, age 76, both hemispheres 47.8
Hippocampus, CA2
nTPM: 57.5
2249 Male, age 74, both hemispheres 70.4
1963 Male, age 80, left hemisphere 63.9
2437 Female, age 94, left hemisphere 56.6
1892 Male, age 76, both hemispheres 56.1
1940 Female, age 85, left hemisphere 55.3
2113 Female, age 91, right hemisphere 42.6
Hippocampus, CA3
nTPM: 64.3
2436 Male, age 74, both hemispheres 116.2
2137 Male, age 80, left hemisphere 58.4
2620 Female, age 94, left hemisphere 57.5
1867 Male, age 76, both hemispheres 55.2
2861 Female, age 67, both hemispheres 51.3
1891 Female, age 85, both hemispheres 47.2
Parahippocampal cortex
nTPM: 50.6
2250 Female, age 67, right hemisphere 62.2
2245 Female, age 91, both hemispheres 56.5
1990 Female, age 91, right hemisphere 55.5
1933 Female, age 85, both hemispheres 55.1
2018 Male, age 76, both hemispheres 53.4
1850 Male, age 80, both hemispheres 52.6
2532 Female, age 72, left hemisphere 49.3
2692 Male, age 74, both hemispheres 44.2
2693 Female, age 94, both hemispheres 39.2
2622 Female, age 67, right hemisphere 38.0
Perirhinal gyrus
nTPM: 56.6
1794 Male, age 80, right hemisphere 65.9
1847 Female, age 91, left hemisphere 62.7
1841 Female, age 85, right hemisphere 55.0
2521 Female, age 94, right hemisphere 53.9
2848 Male, age 76, right hemisphere 45.3
Subiculum
nTPM: 52.6
1977 Female, age 85, both hemispheres 59.3
2619 Male, age 74, both hemispheres 57.8
2042 Male, age 76, both hemispheres 55.0
1901 Male, age 80, both hemispheres 52.8
2729 Female, age 91, right hemisphere 48.7
2438 Female, age 94, left hemisphere 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.6
Samples: 197

Max nTPM: 171.9
Min nTPM: 25.0
Std nTPM: 27.1
Median nTPM: 67.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 171.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 170.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 154.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 149.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 148.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 146.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 139.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 133.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 131.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 128.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.5
FF:10169-103B7 60 years, female 95.5
FF:10153-102I9 76 years, female 83.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.1
Pig sample Sample description nTPM
Subiculum
nTPM: 30.5
Samples: 4

Max nTPM: 35.9
Min nTPM: 28.5
Sample A Female 35.9
Sample B Female 28.9
Sample C Male 28.7
Sample D Male 28.5
Dorsal hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 41.0
Min nTPM: 28.9
Sample A Female 41.0
Sample B Female 38.6
Sample C Male 35.7
Sample D Male 28.9
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 35.7
Min nTPM: 24.8
Sample A Female 29.1
Sample B Female 35.7
Sample C Male 28.6
Sample D Male 24.8
Ventral hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 41.3
Min nTPM: 26.8
Sample A Female 34.5
Sample B Female 26.8
Sample C Male 39.4
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 35.2
Min nTPM: 23.1
Sample A Male 25.5
Sample B Male 35.2
Sample C Female 25.4
Sample D Female 23.1
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 28.3
Min nTPM: 19.1
Sample A Male 19.1
Sample B Male 23.4
Sample C Female 22.0
Sample D Female 28.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
69262242 Antisense, RP_050301_01_H01, Mouse strain C57BL/6J (56 days, male) 1.7

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