HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		156.333
RNA expressioni
Consensus:23.2 nTPM
HPA Brain:15.1 nTPM
GTEx:23.2 nTPM
FANTOM5:13.8 Scaled Tags Per Million
Pig:24.8 nTPM
Mouse:4.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002954
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA002954
Hippocampal formation mean intensity 156.333
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 47.929
Molecular layer of the dentate gyrus 26.282
Granular dentate gyrus 95.890
CA1 - oriens layer 30.295
CA1 - pyramidal layer 97.391
CA1 - radiatum layer 25.219
CA2 - oriens layer 28.033
CA2 - pyramidal layer 63.670
CA2 - radiatum layer 50.591
CA3 - oriens layer 49.123
CA3 - pyramidal layer 156.333
CA3 - radiatum layer 51.131
Stratum lucidum 60.019
Lacunosum moleculare 21.231
Subiculum 72.449

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2621 Female, age 67, right hemisphere 19.9
1911 Female, age 85, right hemisphere 17.1
1898 Male, age 80, left hemisphere 15.6
1855 Male, age 76, left hemisphere 14.7
2148 Female, age 91, left hemisphere 12.5
2529 Female, age 94, left hemisphere 10.6
Dentate gyrus
nTPM: 12.3
1927 Female, age 91, both hemispheres 14.3
2010 Male, age 76, both hemispheres 14.0
2531 Female, age 67, both hemispheres 13.5
2246 Female, age 85, both hemispheres 12.4
2528 Male, age 74, both hemispheres 10.7
2530 Female, age 94, left hemisphere 9.0
Entorhinal gyrus
nTPM: 12.0
1938 Female, age 85, left hemisphere 14.2
1787 Male, age 76, left hemisphere 13.6
2117 Female, age 91, right hemisphere 11.9
2613 Female, age 94, left hemisphere 11.7
2686 Male, age 75, right hemisphere 11.1
2764 Male, age 80, right hemisphere 9.4
Hippocampus, CA1
nTPM: 13.1
2749 Male, age 80, left hemisphere 14.8
1873 Female, age 85, both hemispheres 14.0
2045 Male, age 76, both hemispheres 13.7
2082 Female, age 91, right hemisphere 12.0
2527 Male, age 74, both hemispheres 10.8
Hippocampus, CA2
nTPM: 14.2
1892 Male, age 76, both hemispheres 16.4
1963 Male, age 80, left hemisphere 16.0
2113 Female, age 91, right hemisphere 15.0
1940 Female, age 85, left hemisphere 14.8
2249 Male, age 74, both hemispheres 11.6
2437 Female, age 94, left hemisphere 11.4
Hippocampus, CA3
nTPM: 12.7
1867 Male, age 76, both hemispheres 14.7
2861 Female, age 67, both hemispheres 14.0
1891 Female, age 85, both hemispheres 13.7
2137 Male, age 80, left hemisphere 11.4
2436 Male, age 74, both hemispheres 11.4
2620 Female, age 94, left hemisphere 10.9
Parahippocampal cortex
nTPM: 11.7
2250 Female, age 67, right hemisphere 16.7
2018 Male, age 76, both hemispheres 16.3
2693 Female, age 94, both hemispheres 11.3
1990 Female, age 91, right hemisphere 11.1
2532 Female, age 72, left hemisphere 10.8
1933 Female, age 85, both hemispheres 10.6
1850 Male, age 80, both hemispheres 10.4
2622 Female, age 67, right hemisphere 10.4
2245 Female, age 91, both hemispheres 9.6
2692 Male, age 74, both hemispheres 9.5
Perirhinal gyrus
nTPM: 11.6
1847 Female, age 91, left hemisphere 13.0
1841 Female, age 85, right hemisphere 12.0
2521 Female, age 94, right hemisphere 11.9
1794 Male, age 80, right hemisphere 11.0
2848 Male, age 76, right hemisphere 10.1
Subiculum
nTPM: 12.6
2042 Male, age 76, both hemispheres 16.8
2729 Female, age 91, right hemisphere 13.0
1901 Male, age 80, both hemispheres 12.9
2619 Male, age 74, both hemispheres 12.1
1977 Female, age 85, both hemispheres 11.4
2438 Female, age 94, left hemisphere 9.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.2
Samples: 197

Max nTPM: 82.6
Min nTPM: 5.3
Std nTPM: 9.7
Median nTPM: 21.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 82.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 59.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 53.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 48.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 44.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 43.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 42.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 40.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 39.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 39.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.8
FF:10153-102I9 76 years, female 14.2
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.8
Pig sample Sample description nTPM
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 24.6
Min nTPM: 18.8
Sample A Female 24.2
Sample B Female 24.6
Sample C Male 18.8
Sample D Male 21.8
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 28.8
Min nTPM: 20.1
Sample A Female 28.3
Sample B Female 20.1
Sample C Male 28.8
Sample D Male 22.0
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 21.5
Min nTPM: 9.4
Sample A Female 14.8
Sample B Female 17.8
Sample C Male 21.5
Sample D Male 9.4
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.3
Sample A Female 19.8
Sample B Female 18.3
Sample C Male 15.3
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.2
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.7
Sample A Male 4.4
Sample B Male 3.7
Sample C Female 4.8
Sample D Female 4.0
Hippocampal formation
nTPM: 4.2
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.1
Sample A Male 4.0
Sample B Male 4.4
Sample C Female 3.1
Sample D Female 5.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68203468 Antisense, RP_041208_01_B03, Mouse strain C57BL/6J (56 days, male) 0.1

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