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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
206.4
nTPM
FANTOM5:
187.9
Scaled Tags Per Million
Pig:
81.9
nTPM
Allen mouse:
3.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
206.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 79.2
1984
Male, age 76, both hemispheres
102.0
2301
Female, age 85, both hemispheres
83.9
2188
Female, age 91, both hemispheres
71.7
2090
Male, age 80, both hemispheres
59.2
Dorsal cochlear nucleus nTPM: 67.3
2058
Male, age 76, both hemispheres
82.7
2187
Female, age 91, both hemispheres
73.3
2370
Male, age 61, both hemispheres
66.7
2802
Male, age 74, right hemisphere
59.7
2378
Male, age 80, both hemispheres
54.2
Dorsal tegmental nucleus nTPM: 86.7
2358
Male, age 61, both hemispheres
111.4
2083
Male, age 80, both hemispheres
101.0
1936
Male, age 76, left hemisphere
71.0
2326
Male, age 74, both hemispheres
63.5
Dorsolateral tegmental area nTPM: 71.5
2654
Male, age 80, both hemispheres
95.2
2141
Male, age 76, both hemispheres
80.4
2751
Female, age 85, both hemispheres
70.4
2337
Male, age 61, both hemispheres
62.3
2360
Male, age 74, both hemispheres
49.4
Kolliker-Fuse nucleus nTPM: 104.2
2163
Male, age 80, both hemispheres
154.7
2793
Female, age 91, left hemisphere
96.1
2315
Male, age 76, right hemisphere
62.0
Lateral lemniscal nuclei nTPM: 134.9
2169
Male, age 76, both hemispheres
179.9
2453
Male, age 74, right hemisphere
173.3
2746
Female, age 85, left hemisphere
136.7
2036
Male, age 80, both hemispheres
107.0
2320
Female, age 91, left hemisphere
77.4
Lateral parabrachial nucleus nTPM: 100.5
2139
Female, age 85, right hemisphere
163.7
2790
Male, age 61, both hemispheres
106.0
2013
Male, age 80, both hemispheres
88.7
2792
Male, age 76, both hemispheres
43.6
Lateral vestibular nucleus nTPM: 101.5
2184
Male, age 76, both hemispheres
136.4
2311
Male, age 80, both hemispheres
66.7
Locus coeruleus nTPM: 206.4
2123
Female, age 91, both hemispheres
350.3
1980
Male, age 76, both hemispheres
221.6
2720
Male, age 74, both hemispheres
219.5
2788
Male, age 74, unknown
185.6
2162
Male, age 80, both hemispheres
170.5
2014
Male, age 55, unknown
163.3
2317
Female, age 72, unknown
134.3
Medial parabrachial nucleus nTPM: 99.7
2156
Male, age 61, both hemispheres
124.9
2854
Male, age 80, both hemispheres
120.0
2786
Male, age 76, both hemispheres
90.8
2463
Female, age 85, right hemisphere
88.6
2170
Female, age 91, both hemispheres
74.1
Medial periolivary nuclei nTPM: 130.8
2171
Female, age 85, both hemispheres
211.6
2063
Male, age 76, both hemispheres
164.1
2791
Male, age 74, right hemisphere
122.4
2081
Male, age 80, both hemispheres
82.7
2458
Female, age 91, both hemispheres
73.0
Motor facial nucleus nTPM: 144.3
2365
Male, age 74, right hemisphere
174.1
2062
Male, age 76, both hemispheres
171.4
2327
Male, age 80, both hemispheres
159.7
2697
Female, age 85, both hemispheres
153.1
2126
Male, age 61, both hemispheres
108.2
2795
Female, age 91, both hemispheres
99.1
Motor trigeminal nucleus nTPM: 105.2
2079
Male, age 80, both hemispheres
154.2
2335
Male, age 61, both hemispheres
110.5
2560
Male, age 74, both hemispheres
104.1
2309
Male, age 76, both hemispheres
83.1
2321
Female, age 91, both hemispheres
74.1
Nuclei of the trapezoid body nTPM: 156.5
2159
Male, age 61, both hemispheres
213.0
2735
Female, age 85, both hemispheres
197.7
1983
Male, age 76, both hemispheres
164.0
2166
Male, age 80, both hemispheres
123.4
2368
Female, age 91, both hemispheres
84.3
Nucleus raphe magnus nTPM: 184.6
2160
Male, age 61, both hemispheres
342.2
2172
Female, age 85, both hemispheres
240.3
2455
Male, age 74, both hemispheres
193.2
2328
Male, age 80, both hemispheres
148.5
2051
Male, age 76, both hemispheres
105.6
2459
Female, age 91, both hemispheres
77.9
Paramedian reticular nucleus nTPM: 144.1
2313
Male, age 61, both hemispheres
169.7
2050
Female, age 85, both hemispheres
157.4
2057
Male, age 80, both hemispheres
152.1
2052
Male, age 76, both hemispheres
97.4
Pedunculopontine tegmental nucleus nTPM: 117.0
2334
Male, age 80, both hemispheres
134.1
2338
Male, age 61, both hemispheres
119.4
1921
Female, age 85, both hemispheres
97.5
Pontine nuclei nTPM: 149.2
2727
Male, age 61, right hemisphere
279.4
2787
Female, age 85, both hemispheres
229.5
1863
Male, age 55, unknown
182.7
1968
Male, age 76, left hemisphere
140.6
2109
Female, age 72, unknown
125.8
2115
Male, age 80, left hemisphere
96.7
2319
Female, age 91, both hemispheres
70.7
2454
Male, age 74, left hemisphere
67.7
Pontine raphe nucleus nTPM: 130.4
2122
Female, age 85, midline
164.9
2853
Male, age 76, midline
96.0
Posteroventral cochlear nucleus nTPM: 71.1
2752
Female, age 85, both hemispheres
125.5
2070
Male, age 76, both hemispheres
96.5
2371
Male, age 61, both hemispheres
69.9
2341
Male, age 80, both hemispheres
39.7
2135
Female, age 91, both hemispheres
23.8
Principal sensory trigeminal nucleus nTPM: 158.7
2158
Male, age 61, both hemispheres
272.9
2008
Male, age 80, left hemisphere
168.9
2324
Male, age 76, both hemispheres
113.8
2367
Female, age 91, left hemisphere
79.2
Reticular pontine nucleus, caudal nTPM: 106.1
2332
Male, age 80, right hemisphere
151.4
2092
Male, age 76, both hemispheres
126.8
2559
Male, age 74, both hemispheres
73.1
2457
Female, age 91, both hemispheres
72.9
Reticular pontine nucleus, oral nTPM: 95.5
2012
Female, age 85, both hemispheres
131.9
2361
Male, age 74, both hemispheres
108.1
1939
Male, age 80, both hemispheres
82.3
2366
Female, age 91, both hemispheres
79.7
2167
Male, age 76, both hemispheres
75.5
Reticulotegmental nucleus nTPM: 111.8
2325
Male, age 76, both hemispheres
145.8
2452
Male, age 74, both hemispheres
102.0
2322
Female, age 91, both hemispheres
100.6
2333
Male, age 80, both hemispheres
98.6
Spinal trigeminal nucleus, oral nTPM: 111.4
2164
Male, age 80, both hemispheres
142.2
2737
Female, age 85, both hemispheres
125.5
1978
Male, age 76, both hemispheres
66.4
Subcoeruleus area nTPM: 112.3
2323
Female, age 91, left hemisphere
160.0
1958
Male, age 80, both hemispheres
146.1
2089
Male, age 76, left hemisphere
123.1
2451
Male, age 74, both hemispheres
83.9
2369
Female, age 85, left hemisphere
48.3
Superior olive nTPM: 132.2
1875
Female, age 85, both hemispheres
196.3
2020
Male, age 76, both hemispheres
122.9
2364
Male, age 74, right hemisphere
122.1
2329
Male, age 80, right hemisphere
121.0
2561
Female, age 91, both hemispheres
98.6
Ventral periolivary nuclei nTPM: 156.2
2165
Male, age 80, both hemispheres
199.3
2130
Female, age 85, both hemispheres
192.9
2794
Female, age 91, left hemisphere
118.1
2023
Male, age 76, both hemispheres
114.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 125.2
2449
Male, age 74, both hemispheres
174.4
2840
Female, age 85, both hemispheres
139.3
1959
Male, age 76, both hemispheres
131.0
2359
Male, age 61, both hemispheres
128.4
2161
Male, age 80, both hemispheres
122.8
2456
Female, age 91, both hemispheres
55.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
81.9
Pig sample
Sample description
nTPM
Pons nTPM: 81.9
Samples: 4
Max nTPM: 133.4
Min nTPM: 48.8
Sample A
Female
133.4
Sample B
Female
48.8
Sample C
Male
67.1
Sample D
Male
78.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
