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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
106.1
nTPM
GTEx:
106.1
nTPM
FANTOM5:
171.7
Scaled Tags Per Million
Pig:
26.3
nTPM
Mouse:
14.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
106.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 106.1
Samples: 105
Max nTPM: 676.8
Min nTPM: 32.8
Std nTPM: 78.6
Median nTPM:
308_1
70 years, female
676.8
495_1
57 years, female
388.8
307_1
66 years, female
357.8
218_1
71 years, female
224.9
137_1
83 years, male
205.5
41_1
94 years, female
203.9
173_1
67 years, male
199.6
317_1
60 years, male
195.4
314_1
67 years, male
170.3
35_1
74 years, female
163.7
347_1
72 years, male
157.4
295_1
61 years, female
155.7
490_1
67 years, female
155.1
384_1
83 years, male
150.7
2_1
77 years, female
149.2
491_1
89 years, female
148.6
42_1
85 years, male
147.6
315_1
62 years, female
144.9
89_1
63 years, male
144.3
452_1
88 years, female
138.2
145_1
84 years, male
138.1
237_1
82 years, male
135.1
322_1
76 years, male
131.0
17_1
71 years, male
125.8
117_1
61 years, male
124.6
351_1
91 years, male
122.7
379_1
60 years, male
121.0
375_1
74 years, female
115.3
119_1
70 years, female
115.2
120_1
70 years, female
114.0
447_1
81 years, male
112.2
99_1
64 years, male
110.1
4_1
88 years, female
109.7
501_1
88 years, male
109.6
518_1
75 years, female
105.7
386_1
76 years, male
105.2
506_1
65 years, male
103.7
348_1
84 years, male
102.5
139_1
64 years, female
101.1
396_1
62 years, male
98.7
288_1
66 years, female
98.4
313_1
79 years, female
97.3
6_1
73 years, female
97.0
503_1
68 years, male
95.8
349_1
83 years, male
93.6
291_1
76 years, male
92.9
177_1
74 years, male
91.1
243_1
75 years, male
90.5
404_1
82 years, female
89.1
163_1
78 years, male
89.0
526_1
61 years, male
87.3
311_1
78 years, male
87.0
18_1
88 years, male
85.5
316_1
62 years, male
85.2
43_1
64 years, female
84.1
142_1
61 years, female
84.1
414_1
84 years, female
83.8
264_1
73 years, female
82.8
266_1
85 years, male
82.4
254_1
77 years, female
81.5
109_1
81 years, female
80.7
354_1
81 years, female
79.8
324_1
76 years, male
78.4
353_1
82 years, female
78.0
413_1
59 years, female
76.1
319_1
81 years, male
74.2
189_1
76 years, male
72.6
265_1
87 years, male
72.5
389_1
86 years, female
72.4
406_1
79 years, male
71.8
115_1
83 years, male
70.8
293_1
68 years, female
70.4
318_1
68 years, male
70.4
376_1
75 years, female
68.7
126_1
63 years, male
68.6
172_1
72 years, female
67.8
149_1
88 years, male
67.4
81_1
67 years, male
65.9
162_1
79 years, female
65.4
246_1
77 years, male
64.3
377_1
82 years, female
62.1
480_1
63 years, male
62.1
320_1
89 years, female
61.8
394_1
75 years, female
60.3
335_1
73 years, female
59.2
355_1
70 years, female
58.7
321_1
62 years, female
58.4
405_1
91 years, male
58.4
499_1
55 years, female
57.9
425_1
59 years, female
57.7
350_1
84 years, female
57.4
468_1
89 years, male
55.8
356_1
87 years, female
55.5
251_1
78 years, male
55.2
292_1
71 years, male
54.8
32_1
67 years, male
54.4
415_1
77 years, female
53.8
286_1
68 years, female
52.4
517_1
88 years, male
51.1
217_1
76 years, male
50.8
9_1
66 years, female
46.5
466_1
57 years, female
45.1
153_1
70 years, female
43.3
229_1
69 years, female
38.5
352_1
62 years, male
32.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
