HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:38.9 nTPM
HPA Brain:58.0 nTPM
GTEx:38.9 nTPM
FANTOM5:316.1 Scaled Tags Per Million
Pig:239.0 nTPM
Mouse:88.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001591
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.0
Sample id Sample description nTPM
Hippocampus
nTPM: 58.0
2621 Female, age 67, right hemisphere 67.5
2529 Female, age 94, left hemisphere 63.4
1898 Male, age 80, left hemisphere 62.4
1855 Male, age 76, left hemisphere 57.4
1911 Female, age 85, right hemisphere 50.6
2148 Female, age 91, left hemisphere 46.6
Dentate gyrus
nTPM: 52.0
2531 Female, age 67, both hemispheres 79.5
2246 Female, age 85, both hemispheres 65.0
2530 Female, age 94, left hemisphere 53.2
2010 Male, age 76, both hemispheres 53.0
1927 Female, age 91, both hemispheres 37.4
2528 Male, age 74, both hemispheres 23.6
Entorhinal gyrus
nTPM: 52.1
2686 Male, age 75, right hemisphere 66.7
1787 Male, age 76, left hemisphere 53.4
1938 Female, age 85, left hemisphere 52.2
2117 Female, age 91, right hemisphere 51.8
2764 Male, age 80, right hemisphere 48.4
2613 Female, age 94, left hemisphere 40.3
Hippocampus, CA1
nTPM: 48.8
2749 Male, age 80, left hemisphere 54.9
2527 Male, age 74, both hemispheres 53.7
1873 Female, age 85, both hemispheres 48.9
2045 Male, age 76, both hemispheres 47.2
2082 Female, age 91, right hemisphere 39.3
Hippocampus, CA2
nTPM: 45.6
1940 Female, age 85, left hemisphere 56.8
2437 Female, age 94, left hemisphere 51.8
1892 Male, age 76, both hemispheres 51.6
2113 Female, age 91, right hemisphere 40.8
1963 Male, age 80, left hemisphere 37.0
2249 Male, age 74, both hemispheres 35.5
Hippocampus, CA3
nTPM: 52.1
2861 Female, age 67, both hemispheres 82.3
2137 Male, age 80, left hemisphere 51.7
1867 Male, age 76, both hemispheres 48.3
2620 Female, age 94, left hemisphere 44.7
1891 Female, age 85, both hemispheres 43.9
2436 Male, age 74, both hemispheres 41.4
Parahippocampal cortex
nTPM: 56.7
2245 Female, age 91, both hemispheres 84.2
2622 Female, age 67, right hemisphere 81.5
2532 Female, age 72, left hemisphere 65.9
2692 Male, age 74, both hemispheres 64.4
1850 Male, age 80, both hemispheres 49.5
2250 Female, age 67, right hemisphere 46.9
2018 Male, age 76, both hemispheres 45.6
1933 Female, age 85, both hemispheres 43.9
1990 Female, age 91, right hemisphere 43.2
2693 Female, age 94, both hemispheres 41.7
Perirhinal gyrus
nTPM: 49.1
2848 Male, age 76, right hemisphere 56.7
2521 Female, age 94, right hemisphere 53.7
1794 Male, age 80, right hemisphere 51.1
1841 Female, age 85, right hemisphere 46.8
1847 Female, age 91, left hemisphere 37.0
Subiculum
nTPM: 55.1
2438 Female, age 94, left hemisphere 68.1
1901 Male, age 80, both hemispheres 60.1
1977 Female, age 85, both hemispheres 59.0
2042 Male, age 76, both hemispheres 57.2
2619 Male, age 74, both hemispheres 47.9
2729 Female, age 91, right hemisphere 38.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.9
Samples: 197

Max nTPM: 72.9
Min nTPM: 20.0
Std nTPM: 11.4
Median nTPM: 36.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 72.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 72.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 70.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 70.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 65.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 64.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 64.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 63.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 63.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 61.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 316.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 316.1
FF:10169-103B7 60 years, female 334.4
FF:10153-102I9 76 years, female 297.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 239.0
Pig sample Sample description nTPM
Subiculum
nTPM: 236.8
Samples: 4

Max nTPM: 255.9
Min nTPM: 224.9
Sample A Female 228.7
Sample B Female 255.9
Sample C Male 224.9
Sample D Male 237.8
Dorsal hippocampus
nTPM: 239.0
Samples: 4

Max nTPM: 261.9
Min nTPM: 213.7
Sample A Female 213.7
Sample B Female 228.7
Sample C Male 261.9
Sample D Male 251.7
Entorhinal cortex
nTPM: 217.0
Samples: 4

Max nTPM: 237.3
Min nTPM: 200.3
Sample A Female 200.3
Sample B Female 237.3
Sample C Male 213.3
Sample D Male 216.9
Ventral hippocampus
nTPM: 229.2
Samples: 4

Max nTPM: 281.1
Min nTPM: 167.9
Sample A Female 242.9
Sample B Female 281.1
Sample C Male 167.9
Sample D Male 224.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.4
Samples: 4

Max nTPM: 83.7
Min nTPM: 71.8
Sample A Male 79.0
Sample B Male 83.7
Sample C Female 79.1
Sample D Female 71.8
Hippocampal formation
nTPM: 88.7
Samples: 4

Max nTPM: 98.2
Min nTPM: 78.6
Sample A Male 93.8
Sample B Male 98.2
Sample C Female 84.2
Sample D Female 78.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71325420 Antisense, RP_050825_02_H01, Mouse strain C57BL/6J (56 days, male) 0.1

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