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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
425.3
nTPM
FANTOM5:
338.1
Scaled Tags Per Million
Pig:
907.4
nTPM
Allen mouse:
11.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
425.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 330.9
2188
Female, age 91, both hemispheres
392.2
2090
Male, age 80, both hemispheres
331.4
1984
Male, age 76, both hemispheres
301.3
2301
Female, age 85, both hemispheres
298.6
Dorsal cochlear nucleus nTPM: 330.4
2187
Female, age 91, both hemispheres
395.5
2802
Male, age 74, right hemisphere
373.6
2058
Male, age 76, both hemispheres
305.9
2370
Male, age 61, both hemispheres
293.6
2378
Male, age 80, both hemispheres
283.6
Dorsal tegmental nucleus nTPM: 329.0
2083
Male, age 80, both hemispheres
397.1
2326
Male, age 74, both hemispheres
343.4
1936
Male, age 76, left hemisphere
305.6
2358
Male, age 61, both hemispheres
270.0
Dorsolateral tegmental area nTPM: 337.6
2751
Female, age 85, both hemispheres
377.1
2654
Male, age 80, both hemispheres
362.9
2141
Male, age 76, both hemispheres
338.5
2337
Male, age 61, both hemispheres
318.9
2360
Male, age 74, both hemispheres
290.4
Kolliker-Fuse nucleus nTPM: 344.2
2163
Male, age 80, both hemispheres
406.1
2793
Female, age 91, left hemisphere
343.2
2315
Male, age 76, right hemisphere
283.3
Lateral lemniscal nuclei nTPM: 341.5
2169
Male, age 76, both hemispheres
469.3
2746
Female, age 85, left hemisphere
347.7
2453
Male, age 74, right hemisphere
344.9
2320
Female, age 91, left hemisphere
287.5
2036
Male, age 80, both hemispheres
258.0
Lateral parabrachial nucleus nTPM: 327.2
2139
Female, age 85, right hemisphere
410.4
2013
Male, age 80, both hemispheres
323.2
2792
Male, age 76, both hemispheres
301.2
2790
Male, age 61, both hemispheres
274.2
Lateral vestibular nucleus nTPM: 368.6
2184
Male, age 76, both hemispheres
404.2
2311
Male, age 80, both hemispheres
333.0
Locus coeruleus nTPM: 341.0
2123
Female, age 91, both hemispheres
450.1
2162
Male, age 80, both hemispheres
343.0
2720
Male, age 74, both hemispheres
335.5
2014
Male, age 55, unknown
332.4
2317
Female, age 72, unknown
310.0
2788
Male, age 74, unknown
309.9
1980
Male, age 76, both hemispheres
306.0
Medial parabrachial nucleus nTPM: 362.2
2170
Female, age 91, both hemispheres
460.1
2854
Male, age 80, both hemispheres
364.7
2156
Male, age 61, both hemispheres
336.2
2463
Female, age 85, right hemisphere
326.0
2786
Male, age 76, both hemispheres
323.8
Medial periolivary nuclei nTPM: 352.1
2171
Female, age 85, both hemispheres
451.0
2063
Male, age 76, both hemispheres
425.2
2791
Male, age 74, right hemisphere
308.0
2081
Male, age 80, both hemispheres
289.6
2458
Female, age 91, both hemispheres
286.6
Motor facial nucleus nTPM: 360.4
2062
Male, age 76, both hemispheres
476.0
2365
Male, age 74, right hemisphere
368.1
2126
Male, age 61, both hemispheres
357.1
2697
Female, age 85, both hemispheres
351.4
2327
Male, age 80, both hemispheres
305.9
2795
Female, age 91, both hemispheres
303.6
Motor trigeminal nucleus nTPM: 334.9
2079
Male, age 80, both hemispheres
383.3
2335
Male, age 61, both hemispheres
346.4
2309
Male, age 76, both hemispheres
328.3
2560
Male, age 74, both hemispheres
326.5
2321
Female, age 91, both hemispheres
290.1
Nuclei of the trapezoid body nTPM: 421.3
1983
Male, age 76, both hemispheres
551.0
2159
Male, age 61, both hemispheres
486.2
2735
Female, age 85, both hemispheres
434.1
2166
Male, age 80, both hemispheres
352.0
2368
Female, age 91, both hemispheres
283.4
Nucleus raphe magnus nTPM: 391.9
2160
Male, age 61, both hemispheres
543.4
2172
Female, age 85, both hemispheres
479.0
2455
Male, age 74, both hemispheres
375.5
2051
Male, age 76, both hemispheres
358.6
2328
Male, age 80, both hemispheres
341.1
2459
Female, age 91, both hemispheres
253.6
Paramedian reticular nucleus nTPM: 379.3
2050
Female, age 85, both hemispheres
464.4
2057
Male, age 80, both hemispheres
377.8
2313
Male, age 61, both hemispheres
368.4
2052
Male, age 76, both hemispheres
306.5
Pedunculopontine tegmental nucleus nTPM: 339.8
2334
Male, age 80, both hemispheres
349.4
2338
Male, age 61, both hemispheres
339.5
1921
Female, age 85, both hemispheres
330.6
Pontine nuclei nTPM: 425.3
2787
Female, age 85, both hemispheres
567.9
1863
Male, age 55, unknown
531.8
1968
Male, age 76, left hemisphere
454.0
2727
Male, age 61, right hemisphere
432.6
2109
Female, age 72, unknown
404.4
2454
Male, age 74, left hemisphere
354.9
2319
Female, age 91, both hemispheres
337.6
2115
Male, age 80, left hemisphere
319.3
Pontine raphe nucleus nTPM: 380.6
2122
Female, age 85, midline
437.6
2853
Male, age 76, midline
323.5
Posteroventral cochlear nucleus nTPM: 348.0
2752
Female, age 85, both hemispheres
417.4
2135
Female, age 91, both hemispheres
383.1
2341
Male, age 80, both hemispheres
332.5
2070
Male, age 76, both hemispheres
320.2
2371
Male, age 61, both hemispheres
286.8
Principal sensory trigeminal nucleus nTPM: 367.2
2158
Male, age 61, both hemispheres
472.8
2008
Male, age 80, left hemisphere
356.2
2324
Male, age 76, both hemispheres
337.7
2367
Female, age 91, left hemisphere
302.0
Reticular pontine nucleus, caudal nTPM: 369.5
2092
Male, age 76, both hemispheres
450.9
2559
Male, age 74, both hemispheres
382.9
2332
Male, age 80, right hemisphere
339.9
2457
Female, age 91, both hemispheres
304.2
Reticular pontine nucleus, oral nTPM: 367.3
2167
Male, age 76, both hemispheres
384.2
1939
Male, age 80, both hemispheres
380.5
2361
Male, age 74, both hemispheres
362.8
2012
Female, age 85, both hemispheres
360.8
2366
Female, age 91, both hemispheres
348.2
Reticulotegmental nucleus nTPM: 368.9
2325
Male, age 76, both hemispheres
399.2
2452
Male, age 74, both hemispheres
394.6
2322
Female, age 91, both hemispheres
351.7
2333
Male, age 80, both hemispheres
329.9
Spinal trigeminal nucleus, oral nTPM: 349.9
2164
Male, age 80, both hemispheres
376.8
2737
Female, age 85, both hemispheres
358.1
1978
Male, age 76, both hemispheres
314.8
Subcoeruleus area nTPM: 363.5
1958
Male, age 80, both hemispheres
403.0
2451
Male, age 74, both hemispheres
369.3
2323
Female, age 91, left hemisphere
361.8
2089
Male, age 76, left hemisphere
359.3
2369
Female, age 85, left hemisphere
324.0
Superior olive nTPM: 351.0
1875
Female, age 85, both hemispheres
425.2
2020
Male, age 76, both hemispheres
373.0
2364
Male, age 74, right hemisphere
337.5
2329
Male, age 80, right hemisphere
319.8
2561
Female, age 91, both hemispheres
299.7
Ventral periolivary nuclei nTPM: 369.5
2165
Male, age 80, both hemispheres
417.4
2130
Female, age 85, both hemispheres
395.0
2023
Male, age 76, both hemispheres
344.9
2794
Female, age 91, left hemisphere
320.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 327.3
1959
Male, age 76, both hemispheres
399.3
2840
Female, age 85, both hemispheres
358.8
2449
Male, age 74, both hemispheres
337.6
2161
Male, age 80, both hemispheres
317.9
2359
Male, age 61, both hemispheres
306.2
2456
Female, age 91, both hemispheres
244.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
907.4
Pig sample
Sample description
nTPM
Pons nTPM: 907.5
Samples: 4
Max nTPM: 1212.8
Min nTPM: 539.5
Sample A
Female
1212.8
Sample B
Female
539.5
Sample C
Male
824.8
Sample D
Male
1052.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
