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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
253.1
nTPM
GTEx:
253.1
nTPM
FANTOM5:
236.3
Scaled Tags Per Million
Pig:
299.3
nTPM
Mouse:
1103.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
253.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 253.1
Samples: 105
Max nTPM: 391.7
Min nTPM: 51.0
Std nTPM: 80.4
Median nTPM:
377_1
82 years, female
391.7
319_1
81 years, male
384.3
218_1
71 years, female
383.0
322_1
76 years, male
377.9
320_1
89 years, female
375.5
452_1
88 years, female
369.4
386_1
76 years, male
359.1
506_1
65 years, male
353.1
379_1
60 years, male
348.0
354_1
81 years, female
344.0
355_1
70 years, female
343.3
163_1
78 years, male
341.2
352_1
62 years, male
341.1
243_1
75 years, male
334.0
177_1
74 years, male
332.9
237_1
82 years, male
332.2
376_1
75 years, female
329.8
350_1
84 years, female
328.5
375_1
74 years, female
326.5
6_1
73 years, female
326.1
172_1
72 years, female
318.7
173_1
67 years, male
316.5
353_1
82 years, female
315.8
321_1
62 years, female
315.3
394_1
75 years, female
315.2
406_1
79 years, male
314.6
351_1
91 years, male
313.7
295_1
61 years, female
312.3
316_1
62 years, male
308.7
286_1
68 years, female
307.3
335_1
73 years, female
306.9
318_1
68 years, male
305.7
356_1
87 years, female
303.8
447_1
81 years, male
302.9
405_1
91 years, male
302.7
35_1
74 years, female
301.7
17_1
71 years, male
300.5
404_1
82 years, female
300.1
153_1
70 years, female
296.7
264_1
73 years, female
295.2
4_1
88 years, female
295.0
115_1
83 years, male
290.6
251_1
78 years, male
289.7
349_1
83 years, male
286.1
384_1
83 years, male
284.6
2_1
77 years, female
284.1
189_1
76 years, male
283.3
425_1
59 years, female
283.3
503_1
68 years, male
275.7
292_1
71 years, male
275.6
389_1
86 years, female
274.7
396_1
62 years, male
274.2
229_1
69 years, female
273.0
99_1
64 years, male
269.7
246_1
77 years, male
268.7
480_1
63 years, male
267.1
293_1
68 years, female
266.2
291_1
76 years, male
263.5
517_1
88 years, male
260.7
145_1
84 years, male
259.6
120_1
70 years, female
252.3
348_1
84 years, male
252.2
317_1
60 years, male
248.3
18_1
88 years, male
246.6
347_1
72 years, male
238.6
137_1
83 years, male
237.0
526_1
61 years, male
235.4
254_1
77 years, female
228.6
126_1
63 years, male
226.1
265_1
87 years, male
222.7
217_1
76 years, male
222.2
9_1
66 years, female
218.0
288_1
66 years, female
217.8
41_1
94 years, female
217.4
266_1
85 years, male
216.8
468_1
89 years, male
214.7
518_1
75 years, female
208.8
42_1
85 years, male
199.9
109_1
81 years, female
194.0
311_1
78 years, male
193.1
324_1
76 years, male
181.8
313_1
79 years, female
179.1
139_1
64 years, female
178.5
499_1
55 years, female
177.4
81_1
67 years, male
176.0
162_1
79 years, female
171.0
142_1
61 years, female
168.9
314_1
67 years, male
168.1
117_1
61 years, male
166.7
307_1
66 years, female
156.8
119_1
70 years, female
155.9
315_1
62 years, female
155.4
43_1
64 years, female
132.5
32_1
67 years, male
124.6
495_1
57 years, female
123.1
501_1
88 years, male
122.0
308_1
70 years, female
121.5
415_1
77 years, female
117.9
414_1
84 years, female
114.3
466_1
57 years, female
111.0
89_1
63 years, male
108.5
413_1
59 years, female
87.9
149_1
88 years, male
82.7
490_1
67 years, female
55.2
491_1
89 years, female
51.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.