HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:31.2 nTPM
HPA Brain:45.8 nTPM
GTEx:31.2 nTPM
FANTOM5:46.5 Scaled Tags Per Million
Pig:82.2 nTPM
Mouse:74.0 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012510Antibody CAB008388
Glial cells Not detectedHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.8
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
1898 Male, age 80, left hemisphere 48.9
1855 Male, age 76, left hemisphere 43.8
2621 Female, age 67, right hemisphere 43.3
2148 Female, age 91, left hemisphere 42.0
1911 Female, age 85, right hemisphere 38.3
2529 Female, age 94, left hemisphere 35.5
Dentate gyrus
nTPM: 39.6
2010 Male, age 76, both hemispheres 43.9
1927 Female, age 91, both hemispheres 42.7
2246 Female, age 85, both hemispheres 39.2
2528 Male, age 74, both hemispheres 39.2
2531 Female, age 67, both hemispheres 36.6
2530 Female, age 94, left hemisphere 35.9
Entorhinal gyrus
nTPM: 39.7
1938 Female, age 85, left hemisphere 42.6
2764 Male, age 80, right hemisphere 42.1
2686 Male, age 75, right hemisphere 39.3
2117 Female, age 91, right hemisphere 39.0
1787 Male, age 76, left hemisphere 38.2
2613 Female, age 94, left hemisphere 36.9
Hippocampus, CA1
nTPM: 43.6
2749 Male, age 80, left hemisphere 58.1
2045 Male, age 76, both hemispheres 42.3
1873 Female, age 85, both hemispheres 41.2
2527 Male, age 74, both hemispheres 40.4
2082 Female, age 91, right hemisphere 36.2
Hippocampus, CA2
nTPM: 41.0
1963 Male, age 80, left hemisphere 47.0
1892 Male, age 76, both hemispheres 46.1
2249 Male, age 74, both hemispheres 39.8
1940 Female, age 85, left hemisphere 38.2
2113 Female, age 91, right hemisphere 38.1
2437 Female, age 94, left hemisphere 36.8
Hippocampus, CA3
nTPM: 43.8
2137 Male, age 80, left hemisphere 49.8
2620 Female, age 94, left hemisphere 47.6
1867 Male, age 76, both hemispheres 46.9
2436 Male, age 74, both hemispheres 40.8
1891 Female, age 85, both hemispheres 39.2
2861 Female, age 67, both hemispheres 38.5
Parahippocampal cortex
nTPM: 41.4
1850 Male, age 80, both hemispheres 46.5
1933 Female, age 85, both hemispheres 46.0
2250 Female, age 67, right hemisphere 44.3
2245 Female, age 91, both hemispheres 43.2
2532 Female, age 72, left hemisphere 40.8
2693 Female, age 94, both hemispheres 39.7
2622 Female, age 67, right hemisphere 39.4
1990 Female, age 91, right hemisphere 39.3
2692 Male, age 74, both hemispheres 38.9
2018 Male, age 76, both hemispheres 35.4
Perirhinal gyrus
nTPM: 45.8
1847 Female, age 91, left hemisphere 50.8
1841 Female, age 85, right hemisphere 49.6
1794 Male, age 80, right hemisphere 48.0
2521 Female, age 94, right hemisphere 42.1
2848 Male, age 76, right hemisphere 38.7
Subiculum
nTPM: 40.1
1977 Female, age 85, both hemispheres 42.2
1901 Male, age 80, both hemispheres 41.3
2619 Male, age 74, both hemispheres 40.4
2438 Female, age 94, left hemisphere 39.3
2729 Female, age 91, right hemisphere 38.9
2042 Male, age 76, both hemispheres 38.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.2
Samples: 197

Max nTPM: 50.4
Min nTPM: 20.7
Std nTPM: 5.5
Median nTPM: 30.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 50.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 50.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 48.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 41.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 41.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 41.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 41.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 40.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 40.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 39.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.5
FF:10153-102I9 76 years, female 48.3
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 82.2
Pig sample Sample description nTPM
Subiculum
nTPM: 81.4
Samples: 4

Max nTPM: 106.5
Min nTPM: 70.5
Sample A Female 106.5
Sample B Female 73.6
Sample C Male 74.8
Sample D Male 70.5
Dorsal hippocampus
nTPM: 82.2
Samples: 4

Max nTPM: 99.9
Min nTPM: 62.8
Sample A Female 99.9
Sample B Female 84.7
Sample C Male 81.3
Sample D Male 62.8
Entorhinal cortex
nTPM: 76.5
Samples: 4

Max nTPM: 83.4
Min nTPM: 70.4
Sample A Female 83.4
Sample B Female 79.8
Sample C Male 72.3
Sample D Male 70.4
Ventral hippocampus
nTPM: 79.4
Samples: 4

Max nTPM: 91.0
Min nTPM: 59.9
Sample A Female 80.9
Sample B Female 59.9
Sample C Male 91.0
Sample D Male 85.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.0
Samples: 4

Max nTPM: 77.9
Min nTPM: 67.1
Sample A Male 67.1
Sample B Male 75.4
Sample C Female 75.5
Sample D Female 77.9
Hippocampal formation
nTPM: 73.0
Samples: 4

Max nTPM: 79.4
Min nTPM: 67.4
Sample A Male 79.4
Sample B Male 72.3
Sample C Female 72.8
Sample D Female 67.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
70429375 Antisense, RP_050614_01_E08, Mouse strain C57BL/6J (56 days, male) 7.9

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