HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:49.4 nTPM
HPA Brain:33.1 nTPM
GTEx:49.4 nTPM
FANTOM5:59.6 Scaled Tags Per Million
Pig:5.4 nTPM
Mouse:2.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003162Antibody CAB005191
Glial cells Not detectedMedium
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.1
2529 Female, age 94, left hemisphere 38.5
1911 Female, age 85, right hemisphere 35.1
1898 Male, age 80, left hemisphere 34.4
1855 Male, age 76, left hemisphere 31.5
2148 Female, age 91, left hemisphere 31.0
2621 Female, age 67, right hemisphere 28.3
Dentate gyrus
nTPM: 29.8
2010 Male, age 76, both hemispheres 42.3
2531 Female, age 67, both hemispheres 28.5
2246 Female, age 85, both hemispheres 28.0
2528 Male, age 74, both hemispheres 27.9
1927 Female, age 91, both hemispheres 26.3
2530 Female, age 94, left hemisphere 26.0
Entorhinal gyrus
nTPM: 30.3
2117 Female, age 91, right hemisphere 39.2
1787 Male, age 76, left hemisphere 38.0
1938 Female, age 85, left hemisphere 35.2
2686 Male, age 75, right hemisphere 29.5
2764 Male, age 80, right hemisphere 23.0
2613 Female, age 94, left hemisphere 17.1
Hippocampus, CA1
nTPM: 29.0
2527 Male, age 74, both hemispheres 33.3
2045 Male, age 76, both hemispheres 33.0
1873 Female, age 85, both hemispheres 27.9
2749 Male, age 80, left hemisphere 26.9
2082 Female, age 91, right hemisphere 23.6
Hippocampus, CA2
nTPM: 30.8
2249 Male, age 74, both hemispheres 38.8
2113 Female, age 91, right hemisphere 33.0
1892 Male, age 76, both hemispheres 31.8
2437 Female, age 94, left hemisphere 30.9
1963 Male, age 80, left hemisphere 26.7
1940 Female, age 85, left hemisphere 23.5
Hippocampus, CA3
nTPM: 32.5
1867 Male, age 76, both hemispheres 52.6
2436 Male, age 74, both hemispheres 32.4
2137 Male, age 80, left hemisphere 31.9
1891 Female, age 85, both hemispheres 28.3
2861 Female, age 67, both hemispheres 27.0
2620 Female, age 94, left hemisphere 22.6
Parahippocampal cortex
nTPM: 31.7
2018 Male, age 76, both hemispheres 45.3
2250 Female, age 67, right hemisphere 40.0
1933 Female, age 85, both hemispheres 34.5
1990 Female, age 91, right hemisphere 30.5
2245 Female, age 91, both hemispheres 30.3
1850 Male, age 80, both hemispheres 29.2
2532 Female, age 72, left hemisphere 28.7
2622 Female, age 67, right hemisphere 28.1
2693 Female, age 94, both hemispheres 27.2
2692 Male, age 74, both hemispheres 23.1
Perirhinal gyrus
nTPM: 32.4
1841 Female, age 85, right hemisphere 35.6
1794 Male, age 80, right hemisphere 34.3
2848 Male, age 76, right hemisphere 31.8
2521 Female, age 94, right hemisphere 30.2
1847 Female, age 91, left hemisphere 29.9
Subiculum
nTPM: 31.3
2729 Female, age 91, right hemisphere 35.6
2042 Male, age 76, both hemispheres 32.6
2438 Female, age 94, left hemisphere 32.3
2619 Male, age 74, both hemispheres 31.7
1977 Female, age 85, both hemispheres 28.0
1901 Male, age 80, both hemispheres 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.4
Samples: 197

Max nTPM: 216.1
Min nTPM: 11.4
Std nTPM: 26.6
Median nTPM: 43.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 216.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 195.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 132.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 122.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 115.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 110.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 108.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 101.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 101.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 101.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 93.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.6
FF:10153-102I9 76 years, female 74.7
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.4
Pig sample Sample description nTPM
Subiculum
nTPM: 4.9
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.3
Sample A Female 3.3
Sample B Female 5.0
Sample C Male 5.2
Sample D Male 5.9
Dorsal hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.9
Sample A Female 5.0
Sample B Female 5.1
Sample C Male 5.6
Sample D Male 4.9
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.9
Sample A Female 4.8
Sample B Female 3.9
Sample C Male 5.0
Sample D Male 4.7
Ventral hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.4
Sample A Female 6.5
Sample B Female 5.2
Sample C Male 5.6
Sample D Male 4.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.4
Sample A Male 1.1
Sample B Male 0.4
Sample C Female 0.5
Sample D Female 0.6
Hippocampal formation
nTPM: 2.6
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.4
Sample A Male 1.4
Sample B Male 2.7
Sample C Female 2.6
Sample D Female 3.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70295488 Antisense, RP_050531_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org