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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
183.3
nTPM
HPA Brain:
437.5
nTPM
GTEx:
183.3
nTPM
FANTOM5:
460.1
Scaled Tags Per Million
Pig:
119.5
nTPM
Mouse:
236.4
nTPM
Allen mouse:
12.9
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
437.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 302.3
1827
Male, age 72, unknown
355.9
1870
Female, age 42, unknown
343.9
2411
Female, age 72, unknown
339.4
2666
Male, age 74, left hemisphere
315.3
1833
Male, age 53, unknown
301.4
2828
Female, age 72, unknown
300.8
1830
Male, age 51, unknown
282.6
2586
Male, age 75, left hemisphere
271.0
2219
Male, age 76, both hemispheres
266.2
2019
Male, age 18, unknown
246.8
Dorsal raphe nucleus nTPM: 389.4
2298
Female, age 72, unknown
513.7
2047
Male, age 72, unknown
434.2
2750
Male, age 76, both hemispheres
343.8
1828
Male, age 53, unknown
337.1
2016
Female, age 72, unknown
318.0
Inferior colliculus nTPM: 302.4
2097
Female, age 72, unknown
330.4
2849
Male, age 72, unknown
322.5
1848
Female, age 42, unknown
298.6
1890
Male, age 53, unknown
257.9
Median raphe nucleus nTPM: 437.5
2220
Male, age 76, midline
437.5
Periaquaductal grey, anterior nTPM: 358.8
1947
Male, age 18, unknown
424.5
1795
Male, age 51, unknown
348.7
2502
Female, age 75, unknown
303.2
Periaquaductal grey, dorsal nTPM: 341.1
2850
Male, age 76, both hemispheres
421.6
1840
Male, age 53, unknown
376.6
2464
Female, age 72, unknown
296.0
1831
Male, age 72, unknown
270.0
Periaquaductal grey, lateral nTPM: 341.5
2272
Male, age 74, both hemispheres
368.7
2053
Male, age 18, unknown
327.9
2140
Male, age 76, both hemispheres
327.9
Pretectal area nTPM: 336.2
2224
Female, age 72, unknown
405.5
2273
Male, age 74, both hemispheres
370.5
2825
Male, age 18, unknown
366.2
1816
Male, age 51, unknown
352.1
2667
Female, age 75, unknown
350.1
1815
Male, age 53, unknown
338.9
1817
Female, age 42, unknown
335.1
1944
Female, age 72, unknown
332.1
2007
Male, age 72, unknown
329.4
2407
Male, age 75, both hemispheres
287.6
2316
Male, age 76, right hemisphere
231.0
Red nucleus nTPM: 254.2
2725
Female, age 75, unknown
320.4
1821
Female, age 72, unknown
299.3
2584
Male, age 75, left hemisphere
268.6
1954
Female, age 42, unknown
255.4
1865
Male, age 51, unknown
254.6
2503
Female, age 72, unknown
251.5
1904
Male, age 53, unknown
247.3
2227
Male, age 72, unknown
238.2
2769
Male, age 72, unknown
236.8
2823
Male, age 76, right hemisphere
233.3
2588
Male, age 74, left hemisphere
223.3
2785
Male, age 18, unknown
221.3
Substantia nigra nTPM: 339.9
1916
Female, age 42, unknown
402.1
2241
Male, age 72, unknown
393.6
1851
Male, age 51, unknown
365.2
1941
Male, age 53, unknown
350.8
2409
Female, age 72, unknown
345.1
1889
Female, age 72, unknown
343.7
2699
Male, age 18, unknown
326.2
2590
Female, age 75, unknown
297.4
2665
Male, age 74, both hemispheres
295.7
2583
Male, age 75, right hemisphere
279.0
Superior colliculus nTPM: 289.4
2587
Male, age 74, left hemisphere
337.7
2261
Male, age 18, unknown
327.5
1796
Male, age 53, unknown
323.2
1839
Male, age 51, unknown
300.4
2087
Female, age 72, unknown
294.5
2668
Female, age 75, unknown
287.3
1913
Female, age 42, unknown
265.2
1895
Male, age 76, right hemisphere
262.6
2664
Male, age 75, both hemispheres
251.5
1995
Male, age 72, unknown
243.8
Ventral tegmental area nTPM: 338.5
2410
Female, age 72, unknown
362.2
1915
Female, age 42, unknown
355.5
2218
Male, age 76, both hemispheres
344.2
2021
Male, age 53, unknown
342.2
2223
Female, age 72, unknown
322.8
1942
Male, age 51, unknown
304.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
183.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 183.3
Samples: 139
Max nTPM: 295.3
Min nTPM: 108.6
Std nTPM: 41.7
Median nTPM: 181.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
295.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
294.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
294.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
293.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
276.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
273.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
269.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
264.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
255.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
255.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
253.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
250.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
243.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
243.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
242.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
241.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
240.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
236.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
233.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
230.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
228.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
228.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
225.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
224.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
219.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
215.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
215.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
212.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
211.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
209.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
208.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
207.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
207.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
203.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
202.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
202.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
202.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
201.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
200.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
198.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
197.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
196.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
196.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
196.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
194.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
193.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
191.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
191.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
191.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
190.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
190.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
190.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
190.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
187.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
187.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
187.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
186.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
186.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
185.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
185.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
185.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
185.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
184.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
184.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
184.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
182.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
182.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
182.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
182.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
181.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
180.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
179.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
179.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
178.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
177.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
177.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
177.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
176.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
176.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
174.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
172.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
170.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
170.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
170.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
168.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
168.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
166.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
166.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
165.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
165.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
165.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
163.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
163.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
162.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
162.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
162.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
162.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
159.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
158.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
158.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
156.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
156.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
155.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
155.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
154.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
153.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
153.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
151.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
151.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
148.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
147.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
146.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
146.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
145.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
144.3
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
141.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
139.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
136.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
136.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
135.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
135.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
134.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
134.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
133.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
133.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
131.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
130.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
129.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
128.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
126.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
126.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
125.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
124.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
120.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
117.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
117.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
116.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
108.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
108.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
236.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 236.4
Samples: 4
Max nTPM: 250.9
Min nTPM: 225.9
Sample A
Male
242.3
Sample B
Male
226.4
Sample C
Female
225.9
Sample D
Female
250.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.