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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
415.1
nTPM
FANTOM5:
531.3
Scaled Tags Per Million
Pig:
126.3
nTPM
Allen mouse:
10.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
415.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 236.0
2301
Female, age 85, both hemispheres
259.9
2188
Female, age 91, both hemispheres
254.2
2090
Male, age 80, both hemispheres
228.2
1984
Male, age 76, both hemispheres
201.9
Dorsal cochlear nucleus nTPM: 274.5
2187
Female, age 91, both hemispheres
301.5
2370
Male, age 61, both hemispheres
290.4
2058
Male, age 76, both hemispheres
274.5
2378
Male, age 80, both hemispheres
254.7
2802
Male, age 74, right hemisphere
251.5
Dorsal tegmental nucleus nTPM: 287.2
2083
Male, age 80, both hemispheres
311.4
2326
Male, age 74, both hemispheres
286.0
2358
Male, age 61, both hemispheres
280.7
1936
Male, age 76, left hemisphere
270.5
Dorsolateral tegmental area nTPM: 311.0
2360
Male, age 74, both hemispheres
371.0
2654
Male, age 80, both hemispheres
312.3
2141
Male, age 76, both hemispheres
310.3
2751
Female, age 85, both hemispheres
305.3
2337
Male, age 61, both hemispheres
256.1
Kolliker-Fuse nucleus nTPM: 287.8
2315
Male, age 76, right hemisphere
301.2
2163
Male, age 80, both hemispheres
300.3
2793
Female, age 91, left hemisphere
261.8
Lateral lemniscal nuclei nTPM: 278.6
2036
Male, age 80, both hemispheres
332.7
2169
Male, age 76, both hemispheres
295.0
2746
Female, age 85, left hemisphere
287.2
2453
Male, age 74, right hemisphere
248.4
2320
Female, age 91, left hemisphere
229.8
Lateral parabrachial nucleus nTPM: 290.0
2139
Female, age 85, right hemisphere
313.8
2792
Male, age 76, both hemispheres
292.1
2013
Male, age 80, both hemispheres
290.1
2790
Male, age 61, both hemispheres
264.0
Lateral vestibular nucleus nTPM: 279.7
2311
Male, age 80, both hemispheres
284.5
2184
Male, age 76, both hemispheres
274.8
Locus coeruleus nTPM: 415.1
2014
Male, age 55, unknown
518.5
2123
Female, age 91, both hemispheres
462.2
2788
Male, age 74, unknown
441.3
2317
Female, age 72, unknown
388.1
1980
Male, age 76, both hemispheres
373.5
2720
Male, age 74, both hemispheres
367.9
2162
Male, age 80, both hemispheres
353.9
Medial parabrachial nucleus nTPM: 288.4
2170
Female, age 91, both hemispheres
345.7
2854
Male, age 80, both hemispheres
322.1
2786
Male, age 76, both hemispheres
285.1
2156
Male, age 61, both hemispheres
250.2
2463
Female, age 85, right hemisphere
239.0
Medial periolivary nuclei nTPM: 273.7
2171
Female, age 85, both hemispheres
324.7
2791
Male, age 74, right hemisphere
314.0
2063
Male, age 76, both hemispheres
299.5
2081
Male, age 80, both hemispheres
226.0
2458
Female, age 91, both hemispheres
204.1
Motor facial nucleus nTPM: 281.4
2365
Male, age 74, right hemisphere
346.3
2062
Male, age 76, both hemispheres
302.5
2126
Male, age 61, both hemispheres
276.0
2697
Female, age 85, both hemispheres
275.0
2327
Male, age 80, both hemispheres
244.6
2795
Female, age 91, both hemispheres
244.3
Motor trigeminal nucleus nTPM: 255.6
2335
Male, age 61, both hemispheres
276.9
2560
Male, age 74, both hemispheres
270.4
2309
Male, age 76, both hemispheres
262.1
2079
Male, age 80, both hemispheres
237.8
2321
Female, age 91, both hemispheres
230.7
Nuclei of the trapezoid body nTPM: 280.6
2159
Male, age 61, both hemispheres
329.6
2735
Female, age 85, both hemispheres
319.4
1983
Male, age 76, both hemispheres
293.3
2166
Male, age 80, both hemispheres
237.0
2368
Female, age 91, both hemispheres
223.5
Nucleus raphe magnus nTPM: 295.7
2160
Male, age 61, both hemispheres
369.7
2172
Female, age 85, both hemispheres
325.9
2455
Male, age 74, both hemispheres
298.3
2051
Male, age 76, both hemispheres
295.4
2328
Male, age 80, both hemispheres
246.0
2459
Female, age 91, both hemispheres
239.1
Paramedian reticular nucleus nTPM: 341.9
2050
Female, age 85, both hemispheres
367.5
2313
Male, age 61, both hemispheres
362.4
2052
Male, age 76, both hemispheres
319.6
2057
Male, age 80, both hemispheres
317.9
Pedunculopontine tegmental nucleus nTPM: 319.7
2334
Male, age 80, both hemispheres
341.1
1921
Female, age 85, both hemispheres
340.9
2338
Male, age 61, both hemispheres
277.1
Pontine nuclei nTPM: 303.1
1863
Male, age 55, unknown
364.5
2787
Female, age 85, both hemispheres
351.5
2727
Male, age 61, right hemisphere
321.8
2454
Male, age 74, left hemisphere
316.1
2109
Female, age 72, unknown
313.9
1968
Male, age 76, left hemisphere
266.0
2319
Female, age 91, both hemispheres
254.5
2115
Male, age 80, left hemisphere
236.5
Pontine raphe nucleus nTPM: 351.8
2853
Male, age 76, midline
379.4
2122
Female, age 85, midline
324.1
Posteroventral cochlear nucleus nTPM: 264.9
2752
Female, age 85, both hemispheres
306.6
2371
Male, age 61, both hemispheres
287.6
2070
Male, age 76, both hemispheres
276.4
2135
Female, age 91, both hemispheres
237.6
2341
Male, age 80, both hemispheres
216.3
Principal sensory trigeminal nucleus nTPM: 282.4
2158
Male, age 61, both hemispheres
315.6
2008
Male, age 80, left hemisphere
293.1
2324
Male, age 76, both hemispheres
269.0
2367
Female, age 91, left hemisphere
252.0
Reticular pontine nucleus, caudal nTPM: 249.0
2092
Male, age 76, both hemispheres
274.8
2559
Male, age 74, both hemispheres
265.7
2332
Male, age 80, right hemisphere
248.6
2457
Female, age 91, both hemispheres
207.0
Reticular pontine nucleus, oral nTPM: 307.5
2012
Female, age 85, both hemispheres
338.9
2361
Male, age 74, both hemispheres
329.6
1939
Male, age 80, both hemispheres
322.8
2167
Male, age 76, both hemispheres
301.9
2366
Female, age 91, both hemispheres
244.5
Reticulotegmental nucleus nTPM: 271.7
2325
Male, age 76, both hemispheres
306.8
2333
Male, age 80, both hemispheres
261.7
2322
Female, age 91, both hemispheres
259.4
2452
Male, age 74, both hemispheres
258.7
Spinal trigeminal nucleus, oral nTPM: 260.2
2737
Female, age 85, both hemispheres
277.5
2164
Male, age 80, both hemispheres
252.5
1978
Male, age 76, both hemispheres
250.5
Subcoeruleus area nTPM: 294.7
2323
Female, age 91, left hemisphere
352.3
1958
Male, age 80, both hemispheres
325.4
2369
Female, age 85, left hemisphere
305.2
2451
Male, age 74, both hemispheres
248.6
2089
Male, age 76, left hemisphere
242.1
Superior olive nTPM: 291.5
2364
Male, age 74, right hemisphere
350.6
1875
Female, age 85, both hemispheres
349.9
2020
Male, age 76, both hemispheres
275.4
2329
Male, age 80, right hemisphere
253.3
2561
Female, age 91, both hemispheres
228.5
Ventral periolivary nuclei nTPM: 286.3
2130
Female, age 85, both hemispheres
353.8
2165
Male, age 80, both hemispheres
288.7
2023
Male, age 76, both hemispheres
286.4
2794
Female, age 91, left hemisphere
216.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 282.4
2840
Female, age 85, both hemispheres
338.2
2359
Male, age 61, both hemispheres
328.1
2449
Male, age 74, both hemispheres
275.2
1959
Male, age 76, both hemispheres
273.7
2161
Male, age 80, both hemispheres
256.0
2456
Female, age 91, both hemispheres
223.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
126.3
Pig sample
Sample description
nTPM
Pons nTPM: 126.3
Samples: 4
Max nTPM: 139.4
Min nTPM: 111.5
Sample A
Female
124.0
Sample B
Female
130.4
Sample C
Male
139.4
Sample D
Male
111.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
